Stem-loop sfr-mir-7

Accession

MI0033624

Description

Spodoptera frugiperda sfr-mir-7 precursor miRNA

Literature search

2 open access papers mention sfr-mir-7
(2 sentences)

Sequence

48635 reads, 2893.0 reads per million, 42 experiments

ggccacacguuguuUGGAAGACUAGUGAUUUUGUUGUUUugauuuggguaaCAAGAAAUCACUAAUCUCCCUacaaaguacggcu
((((..((.((((..(((.((.((((((((((.(((((...........))))))))))))))).)))))..)))).))..))))

Structure

    ac  g    uU   A  C          G     Uuga 
ggcc  ac uugu  GGA GA UAGUGAUUUU UUGUU    u
||||  || ||||  ||| || |||||||||| |||||    u
ucgg  ug aaca  CCU CU AUCACUAAAG AACaa    u
    ca  a    UC   -  A          -     uggg 

Annotation confidence High

Genome context

JQCY02002267.1: 91988-92072 [-]

Mature sfr-miR-7-5p

• Accession: MIMAT0041923
• Description: Spodoptera frugiperda sfr-miR-7-5p mature miRNA
• Sequence: 15 - UGGAAGACUAGUGAUUUUGUUGUUU - 39
• Evidence: experimental ; Illumina [1]

Mature sfr-miR-7-3p

• Accession: MIMAT0041924
• Description: Spodoptera frugiperda sfr-miR-7-3p mature miRNA
• Sequence: 52 - CAAGAAAUCACUAAUCUCCCU - 72
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25693181
   Identification and characteristics of microRNAs from army worm, Spodoptera frugiperda cell line Sf21
   Kakumani PK, Chinnappan M, Singh AK, Malhotra P, Mukherjee SK, Bhatnagar RK
   PLoS One (2015) 10:e0116988