Stem-loop sfr-mir-10494

Accession

MI0033620

Description

Spodoptera frugiperda sfr-mir-10494 precursor miRNA

Literature search

1 open access papers mention sfr-mir-10494
(1 sentences)

Sequence

3332 reads, 166.0 reads per million, 42 experiments

auaggcgUGAACAAGGUGGGCAAUGAACAauuucuauucUCCAUUGCCCACCUUGUUCACGUccuau
(((((((((((((((((((((((((...(((....)))...)))))))))))))))))))).)))))

Structure

     -                    AAC   u 
auagg cgUGAACAAGGUGGGCAAUG   Aau u
||||| ||||||||||||||||||||   |||  
uaucc GCACUUGUUCCACCCGUUAC   uua c
     U                    CUc   u 

Annotation confidence High

Genome context

JQCY02003872.1: 5271-5337 [-]

Clustered miRNAs

2 other miRNAs are < 10 kb from sfr-mir-10494

Mature sfr-miR-10494-5p

• Accession: MIMAT0041918
• Description: Spodoptera frugiperda sfr-miR-10494-5p mature miRNA
• Sequence: 8 - UGAACAAGGUGGGCAAUGAACA - 29
• Evidence: experimental ; Illumina [1]

Mature sfr-miR-10494-3p

• Accession: MIMAT0041919
• Description: Spodoptera frugiperda sfr-miR-10494-3p mature miRNA
• Sequence: 40 - UCCAUUGCCCACCUUGUUCACGU - 62
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25693181
   Identification and characteristics of microRNAs from army worm, Spodoptera frugiperda cell line Sf21
   Kakumani PK, Chinnappan M, Singh AK, Malhotra P, Mukherjee SK, Bhatnagar RK
   PLoS One (2015) 10:e0116988