Stem-loop sfr-mir-10495-3

Accession

MI0033623

Description

Spodoptera frugiperda sfr-mir-10495-3 precursor miRNA

Sequence

2148 reads, 179.0 reads per million, 40 experiments

uaguucugCAUCAACCGGGGAUUGUCCUUugguguaCAGGGAUAAUCGCCGGCUGAcgucccauua
.......((.(((.((((.((((((((((.(.....))))))))))).)))).))).)).......

Structure

uaguucu  A   A    G          u g 
       gC UCA CCGG GAUUGUCCUU g u
       || ||| |||| |||||||||| | g
       ug AGU GGCC CUAAUAGGGA C u
auuaccc  c   C    G          - a 

Annotation confidence Medium

Genome context

JQCY02006190.1: 30726-30791 [-]

Mature sfr-miR-10495-5p

• Accession: MIMAT0041920
• Description: Spodoptera frugiperda sfr-miR-10495-5p mature miRNA
• Sequence: 9 - CAUCAACCGGGGAUUGUCCUU - 29
• Evidence: experimental ; Illumina [1]

Mature sfr-miR-10495-3-3p

• Accession: MIMAT0041922
• Description: Spodoptera frugiperda sfr-miR-10495-3-3p mature miRNA
• Sequence: 37 - CAGGGAUAAUCGCCGGCUGA - 56
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25693181
   Identification and characteristics of microRNAs from army worm, Spodoptera frugiperda cell line Sf21
   Kakumani PK, Chinnappan M, Singh AK, Malhotra P, Mukherjee SK, Bhatnagar RK
   PLoS One (2015) 10:e0116988