Stem-loop sfr-mir-10454g

Accession

MI0033574

Description

Spodoptera frugiperda sfr-mir-10454g precursor miRNA

Sequence

3120 reads, 210.0 reads per million, 42 experiments

cUAUUACAAUUGUGUCAGAAUcgucgaucacugagcagugcggacgaagcuauacaaccuacauagCUCCGUCCCUCUUGCACUGcucaaugauugacgauucugacacaauuguaauag
((((((((((((((((((((((((((((((.(((((((((((((((.((((((.........)))))).))))).....)))))))))).))))))))))))))))))))))))))))))

Structure

                              c          -----     a      aca 
cUAUUACAAUUGUGUCAGAAUcgucgauca ugagcagugc     ggacg agcuau   a
|||||||||||||||||||||||||||||| ||||||||||     ||||| ||||||   c
gauaauguuaacacagucuuagcaguuagu acucGUCACG     CCUGC UCgaua   c
                              a          UUCUC     C      cau 

Annotation confidence Low

Genome context

JQCY02003717.1: 20130-20249 [+]

Mature sfr-miR-10454g-5p

• Accession: MIMAT0041830
• Description: Spodoptera frugiperda sfr-miR-10454g-5p mature miRNA
• Sequence: 2 - UAUUACAAUUGUGUCAGAAU - 21
• Evidence: experimental ; Illumina [1]

Mature sfr-miR-10454g-3p

• Accession: MIMAT0041831
• Description: Spodoptera frugiperda sfr-miR-10454g-3p mature miRNA
• Sequence: 67 - CUCCGUCCCUCUUGCACUG - 85
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25693181
   Identification and characteristics of microRNAs from army worm, Spodoptera frugiperda cell line Sf21
   Kakumani PK, Chinnappan M, Singh AK, Malhotra P, Mukherjee SK, Bhatnagar RK
   PLoS One (2015) 10:e0116988