Stem-loop sfr-mir-10461a

Accession

MI0033552

Description

Spodoptera frugiperda sfr-mir-10461a precursor miRNA

Sequence

uuugaCGAGGACUGGACUAGUGUCAaguaaugcuagagggucgugcucauuaguagcauuccccaacacguggaaugcugcuuauaaauaugauccucuaguaagacuugacACUAGUCGAGUUUCUCGUCaaa
.((((((((((((.((((((((((((((..(((((((((((((((......((((((((((((......).)))))))))))......)))))))))))))))..)))))))))))))).)).)))))))))).

Structure

u          -  G              aa               cucauu           - ca 
 uugaCGAGGA CU GACUAGUGUCAagu  ugcuagagggucgug      aguagcauucc c  a
 |||||||||| || ||||||||||||||  |||||||||||||||      ||||||||||| |   
 aaCUGCUCUU GA CUGAUCAcaguuca  augaucuccuaguau      ucgucguaagg g  c
a          U  G              ga               aaauau           u ca 

Annotation confidence Not enough data

Genome context

JQCY02003420.1: 17841-17974 [-]

Mature sfr-miR-10461a-5p

• Accession: MIMAT0041788
• Description: Spodoptera frugiperda sfr-miR-10461a-5p mature miRNA
• Sequence: 6 - CGAGGACUGGACUAGUGUCA - 25
• Evidence: experimental ; Illumina [1]

Mature sfr-miR-10461a-3p

• Accession: MIMAT0041789
• Description: Spodoptera frugiperda sfr-miR-10461a-3p mature miRNA
• Sequence: 113 - ACUAGUCGAGUUUCUCGUC - 131
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25693181
   Identification and characteristics of microRNAs from army worm, Spodoptera frugiperda cell line Sf21
   Kakumani PK, Chinnappan M, Singh AK, Malhotra P, Mukherjee SK, Bhatnagar RK
   PLoS One (2015) 10:e0116988