Stem-loop sfr-mir-10

Accession

MI0033629

Description

Spodoptera frugiperda sfr-mir-10 precursor miRNA

Literature search

1 open access papers mention sfr-mir-10
(1 sentences)

Sequence

1277996 reads, 80691.0 reads per million, 42 experiments

gugcccuacaucuACCCUGUAGAUCCGAAUUUGUUUGaagugaggcgaCAAAUUCGGUUCUAGAGAGGUUUguguggugcau
((((.((((((..(((((.((((.(((((((((((...........))))))))))).)))).)).)))..)))))).))))

Structure

    c      cu   -  G    U           UGaa 
gugc cuacau  ACC CU UAGA CCGAAUUUGUU    g
|||| ||||||  ||| || |||| |||||||||||    u
uacg ggugug  UGG GA AUCU GGCUUAAACag    g
    u      UU   A  G    U           cgga 

Annotation confidence High

Genome context

JQCY02000152.1: 272265-272346 [+]

Mature sfr-miR-10-5p

• Accession: MIMAT0041933
• Description: Spodoptera frugiperda sfr-miR-10-5p mature miRNA
• Sequence: 14 - ACCCUGUAGAUCCGAAUUUGUUUG - 37
• Evidence: experimental ; Illumina [1]

Mature sfr-miR-10-3p

• Accession: MIMAT0041934
• Description: Spodoptera frugiperda sfr-miR-10-3p mature miRNA
• Sequence: 49 - CAAAUUCGGUUCUAGAGAGGUUU - 71
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25693181
   Identification and characteristics of microRNAs from army worm, Spodoptera frugiperda cell line Sf21
   Kakumani PK, Chinnappan M, Singh AK, Malhotra P, Mukherjee SK, Bhatnagar RK
   PLoS One (2015) 10:e0116988