Stem-loop sfr-mir-10480

Accession

MI0033586

Description

Spodoptera frugiperda sfr-mir-10480 precursor miRNA

Sequence

7652 reads, 464.0 reads per million, 40 experiments

aguuuccguggcguGUUUAGCCGUCACAGUGACAUUUuuaaacuacauaaUGUCACUUUGACAGCAAACCACaacauggaaaacu
..((((((((..((((((.((.((((.(((((((((............))))))))).)))).))))).)))..))))))))...

Structure

-ag        gc   -   A  C    C         Uuuaa 
   uuuccgug  guG UUU GC GUCA AGUGACAUU     a
   ||||||||  ||| ||| || |||| |||||||||      
   aaagguac  CAC AAA CG CAGU UCACUGUaa     c
uca        aa   C   -  A    U         uacau 

Annotation confidence High

Genome context

JQCY02000950.1: 44247-44331 [+]

Mature sfr-miR-10480-5p

• Accession: MIMAT0041853
• Description: Spodoptera frugiperda sfr-miR-10480-5p mature miRNA
• Sequence: 15 - GUUUAGCCGUCACAGUGACAUUU - 37
• Evidence: experimental ; Illumina [1]

Mature sfr-miR-10480-3p

• Accession: MIMAT0041854
• Description: Spodoptera frugiperda sfr-miR-10480-3p mature miRNA
• Sequence: 51 - UGUCACUUUGACAGCAAACCAC - 72
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25693181
   Identification and characteristics of microRNAs from army worm, Spodoptera frugiperda cell line Sf21
   Kakumani PK, Chinnappan M, Singh AK, Malhotra P, Mukherjee SK, Bhatnagar RK
   PLoS One (2015) 10:e0116988