Stem-loop bmo-mir-92a

Accession

MI0015936

Description

Bombyx mori bmo-mir-92a precursor miRNA

Literature search

6 open access papers mention bmo-mir-92a
(16 sentences)

Sequence

51308 reads, 925.0 reads per million, 34 experiments

ggcccguuuggcuGGGCAGUGACUGGCGCCAUAUUCgguacgugugcgaUAUUGCACCAGUCCCGGCCUAUccgagcgggc
.((((((((((.(((((.(.((((((.((.((((.((.........)))))).)).)))))).).))))).))))))))))

Structure

g          c     A U      C  C    U  gua 
 gcccguuugg uGGGC G GACUGG GC AUAU Cg   c
 |||||||||| ||||| | |||||| || |||| ||   g
 cgggcgagcc AUCCG C CUGACC CG UAUa gc   u
-          U     G C      A  U    -  gug 

Annotation confidence High

Genome context

dbj|BSVE01000007.1|: 12345626-12345706 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from bmo-mir-92a

Mature bmo-miR-92a-5p

• Accession: MIMAT0053292
• Description: Bombyx mori bmo-miR-92a-5p mature miRNA
• Sequence: 14 - GGGCAGUGACUGGCGCCAUAUUC - 36
• Evidence: not_experimental

Mature bmo-miR-92a-3p

• Accession: MIMAT0016927
• Description: Bombyx mori bmo-miR-92a-3p mature miRNA
• Sequence: 50 - UAUUGCACCAGUCCCGGCCUAU - 71
• Evidence: not_experimental

References

1. PubMed ID: 20199675
   MicroRNAs of Bombyx mori identified by Solexa sequencing
   Liu S, Li D, Li Q, Zhao P, Xiang Z, Xia Q
   BMC Genomics (2010) 11:148