miRBase entry: sfr-mir-10462-1

Stem-loop sfr-mir-10462-1


Accession
MI0033555
Description
Spodoptera frugiperda sfr-mir-10462-1 precursor miRNA


Sequence

2302 reads, 167.0 reads per million, 41 experiments
acccuaaaacaagaauauaagAAUUUAAGCAGUCGGGACCCauucuagaaagucauaauucauaauauuuagAAUGGGUCCCGACUGCUUAAauucuuauauucuuguuuuagggu
(((((((((((((((((((((((((((((((((((((((((((((((((..................)))))))))))))))))))))))))))))))))))))))))))))))))

Structure
                                                 aagucaua 
acccuaaaacaagaauauaagAAUUUAAGCAGUCGGGACCCauucuaga        a
|||||||||||||||||||||||||||||||||||||||||||||||||         
ugggauuuuguucuuauauucuuaAAUUCGUCAGCCCUGGGUAAgauuu        u
                                                 auaauacu 


Annotation confidence Low
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Genome context
JQCY02004987.1: 2334-2449 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from sfr-mir-10462-1
Name Accession Chromosome Start End Strand Confidence




Database links

Mature sfr-miR-10462-5p

Accession MIMAT0041794
Description Spodoptera frugiperda sfr-miR-10462-5p mature miRNA
Sequence 22 - AAUUUAAGCAGUCGGGACCC - 41
Evidence experimental
Illumina [1]

Mature sfr-miR-10462-3p

Accession MIMAT0041795
Description Spodoptera frugiperda sfr-miR-10462-3p mature miRNA
Sequence 73 - AAUGGGUCCCGACUGCUUAA - 92
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 25693181
    Identification and characteristics of microRNAs from army worm, Spodoptera frugiperda cell line Sf21
    Kakumani PK, Chinnappan M, Singh AK, Malhotra P, Mukherjee SK, Bhatnagar RK
    PLoS One (2015) 10:e0116988