Stem-loop sfr-mir-10456

Accession

MI0033547

Description

Spodoptera frugiperda sfr-mir-10456 precursor miRNA

Sequence

236 reads, 30.0 reads per million, 35 experiments

uaacgucAUAAAUAUCCUGCAUCGCACaucugaaguuuacaugcGAUGCAGGAUAUUUAUGACGU
..((((((((((((((((((((((((...............))))))))))))))))))))))))

Structure

ua                        Caucug 
  acgucAUAAAUAUCCUGCAUCGCA      a
  ||||||||||||||||||||||||      a
  UGCAGUAUUUAUAGGACGUAGcgu      g
--                        acauuu 

Annotation confidence Medium

Genome context

JQCY02000394.1: 108849-108913 [+]

Mature sfr-miR-10456-5p

• Accession: MIMAT0041778
• Description: Spodoptera frugiperda sfr-miR-10456-5p mature miRNA
• Sequence: 8 - AUAAAUAUCCUGCAUCGCAC - 27
• Evidence: experimental ; Illumina [1]

Mature sfr-miR-10456-3p

• Accession: MIMAT0041779
• Description: Spodoptera frugiperda sfr-miR-10456-3p mature miRNA
• Sequence: 45 - GAUGCAGGAUAUUUAUGACGU - 65
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25693181
   Identification and characteristics of microRNAs from army worm, Spodoptera frugiperda cell line Sf21
   Kakumani PK, Chinnappan M, Singh AK, Malhotra P, Mukherjee SK, Bhatnagar RK
   PLoS One (2015) 10:e0116988