Stem-loop sfr-mir-10506

Accession

MI0033643

Description

Spodoptera frugiperda sfr-mir-10506 precursor miRNA

Sequence

272 reads, 33.0 reads per million, 30 experiments

gcgucuuuuccuguuucagaucuacAUCUGGCAAUGGAGAACCCaUUGGACGAUGUAGUUGUGAAAcaggaaaaaacgc
((((.(((((((((((((.(.(((((((...((((((.....))))))...))))))).).))))))))))))).))))

Structure

    c             g u       UGG      A 
gcgu uuuuccuguuuca a cuacAUC   CAAUGG G
|||| ||||||||||||| | |||||||   |||||| A
cgca aaaaggacAAAGU U GAUGUAG   GUUaCC A
    a             G U       CAG      C 

Annotation confidence Low

Genome context

JQCY02003193.1: 4033-4111 [+]

Mature sfr-miR-10506-5p

• Accession: MIMAT0041952
• Description: Spodoptera frugiperda sfr-miR-10506-5p mature miRNA
• Sequence: 26 - AUCUGGCAAUGGAGAACCC - 44
• Evidence: experimental ; Illumina [1]

Mature sfr-miR-10506-3p

• Accession: MIMAT0041953
• Description: Spodoptera frugiperda sfr-miR-10506-3p mature miRNA
• Sequence: 46 - UUGGACGAUGUAGUUGUGAAA - 66
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25693181
   Identification and characteristics of microRNAs from army worm, Spodoptera frugiperda cell line Sf21
   Kakumani PK, Chinnappan M, Singh AK, Malhotra P, Mukherjee SK, Bhatnagar RK
   PLoS One (2015) 10:e0116988