miRBase entry: sfr-mir-10488

Dead hairpin entry

Stem-loop sfr-mir-10488


Accession
MI0033605
Description
Spodoptera frugiperda sfr-mir-10488 precursor miRNA
Comment
The pattern of deep sequencing reads mapping to this locus does not support its annotation as a microRNA.


Sequence

5448 reads, 460.0 reads per million, 41 experiments
agugcaaucgauguUUUUUCCAGUACUUUAGUUUUUAGCcacccucuaggaaacaacaugaaugcugUCGGAAUAAACAUUGAUAAGGCACU
(((((.((((((((((.((((((((.(((((((.....((........))....))).))))))))...)))).))))))))))...)))))

Structure
     --a          U    ---    C    -   UUUAG  acc 
agugc   aucgauguUU UUCC   AGUA UUUA GUU     Cc   c
|||||   |||||||||| ||||   |||| |||| |||     ||    
UCACG   UAGUUACAAA AAGG   ucgu aagu caa     gg   u
     GAA          U    CUg    -    a   -caaa  auc