Stem-loop sfr-mir-10454b

Accession

MI0033553

Description

Spodoptera frugiperda sfr-mir-10454b precursor miRNA

Sequence

8876 reads, 554.0 reads per million, 42 experiments

aucaggggccuuagucugcuauuacaauugugucggaauggucgaucauugaucauugcaagaggggcggagcUAUGUAGGUUGUAUAGCUcugucccucuugcacugcucaaugucgaccauucugacacaauugUAAUAGCAGACUAAGGCCCCUGau
(((((((((((((((((((((((((((((((((((((((((((((.((((((.((.(((((((((((((((((((((.......))))))))))))))))))))).)).)))))))))))))))))))))))))))))))))))))))))))))))))))

Structure

                                             u      u  u                     UA 
aucaggggccuuagucugcuauuacaauugugucggaauggucga cauuga ca ugcaagaggggcggagcUAUG  G
||||||||||||||||||||||||||||||||||||||||||||| |||||| || |||||||||||||||||||||  G
uaGUCCCCGGAAUCAGACGAUAAUguuaacacagucuuaccagcu guaacu gu acguucucccugucUCGAUAU  U
                                             -      c  c                     GU 

Annotation confidence Low

Genome context

JQCY02025556.1: 253-412 [-]

Mature sfr-miR-10454b-5p

• Accession: MIMAT0041790
• Description: Spodoptera frugiperda sfr-miR-10454b-5p mature miRNA
• Sequence: 74 - UAUGUAGGUUGUAUAGCU - 91
• Evidence: experimental ; Illumina [1]

Mature sfr-miR-10454b-3p

• Accession: MIMAT0041791
• Description: Spodoptera frugiperda sfr-miR-10454b-3p mature miRNA
• Sequence: 137 - UAAUAGCAGACUAAGGCCCCUG - 158
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25693181
   Identification and characteristics of microRNAs from army worm, Spodoptera frugiperda cell line Sf21
   Kakumani PK, Chinnappan M, Singh AK, Malhotra P, Mukherjee SK, Bhatnagar RK
   PLoS One (2015) 10:e0116988