miRBase entry: sfr-mir-210

Stem-loop sfr-mir-210


Accession
MI0033540
Description
Spodoptera frugiperda sfr-mir-210 precursor miRNA


Sequence

2526 reads, 97.0 reads per million, 37 experiments
AGCUGCUGGCCACUGCACAAGAUUaguuagaacuauacuCUUGUGCGUGUGACAGCGGCU
((((((((..((((((((((((.((((....))))...))))))))).))).))))))))

Structure
        GC   -         --U    u 
AGCUGCUG  CAC UGCACAAGA   Uagu a
||||||||  ||| |||||||||   ||||  
UCGGCGAC  GUG GCGUGUUCu   auca g
        -A   U         cau    a 


Annotation confidence High
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Genome context
JQCY02000420.1: 65262-65321 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from sfr-mir-210
Name Accession Chromosome Start End Strand Confidence




Database links

Mature sfr-miR-210-5p

Accession MIMAT0041765
Description Spodoptera frugiperda sfr-miR-210-5p mature miRNA
Sequence 1 - AGCUGCUGGCCACUGCACAAGAUU - 24
Evidence experimental
Illumina [1]

Mature sfr-miR-210-3p

Accession MIMAT0041766
Description Spodoptera frugiperda sfr-miR-210-3p mature miRNA
Sequence 40 - CUUGUGCGUGUGACAGCGGCU - 60
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 25693181
    Identification and characteristics of microRNAs from army worm, Spodoptera frugiperda cell line Sf21
    Kakumani PK, Chinnappan M, Singh AK, Malhotra P, Mukherjee SK, Bhatnagar RK
    PLoS One (2015) 10:e0116988