Stem-loop sfr-mir-10482

Accession

MI0033588

Description

Spodoptera frugiperda sfr-mir-10482 precursor miRNA

Sequence

211133 reads, 10793.0 reads per million, 42 experiments

uacguaguucgguaUCGGUGAAUGCCAACGGAUUUCauagcuacuagcuauacucacagaAAUCCUUUGAUAUUCACCGGUAUcgcgcuacgua
((((((((.(((((((((((((((.(((.(((((((((((((...)))))).......))))))).))).))))))))))))))).))))))))

Structure

        u               C   C       -------      a 
uacguagu cgguaUCGGUGAAUG CAA GGAUUUC       auagcu  
|||||||| ||||||||||||||| ||| |||||||       |||||| c
augcaucg gcUAUGGCCACUUAU GUU CCUAAag       uaucga  
        c               A   U       acacuca      u 

Annotation confidence High

Genome context

JQCY02014030.1: 2442-2535 [-]

Mature sfr-miR-10482-5p

• Accession: MIMAT0041857
• Description: Spodoptera frugiperda sfr-miR-10482-5p mature miRNA
• Sequence: 15 - UCGGUGAAUGCCAACGGAUUUC - 36
• Evidence: experimental ; Illumina [1]

Mature sfr-miR-10482-3p

• Accession: MIMAT0041858
• Description: Spodoptera frugiperda sfr-miR-10482-3p mature miRNA
• Sequence: 61 - AAUCCUUUGAUAUUCACCGGUAU - 83
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25693181
   Identification and characteristics of microRNAs from army worm, Spodoptera frugiperda cell line Sf21
   Kakumani PK, Chinnappan M, Singh AK, Malhotra P, Mukherjee SK, Bhatnagar RK
   PLoS One (2015) 10:e0116988