miRBase entry: sfr-mir-10455

Stem-loop sfr-mir-10455


Accession
MI0033546
Description
Spodoptera frugiperda sfr-mir-10455 precursor miRNA


Sequence

6084 reads, 362.0 reads per million, 42 experiments
gucccccugcaagggggugaCCCUGUUGGUCUCGGAUGUcuuucuaaaucaaucaaaucuaugaugagaucuugcuacauaucgaccuuccuugggUAUAGUUAGACGUCCGAGAuguuucacggucuccccugaaaagggggac
((((((((....(((((.((((.((...(((((((((((((..(((.(((.((((......))))..)))..............((((.....)))).)))..)))))))))))))....)).)))).)))))....))))))))

Structure
        gcaa     u    C  -UUG             uu   aaucaaucaaaucuaugaugagaucuugcuacauaucg    u 
gucccccu    ggggg gaCC UG    GUCUCGGAUGUcu  cua                                      accu c
||||||||    ||||| |||| ||    |||||||||||||  |||                                      |||| c
caggggga    ucccc cugg ac    uAGAGCCUGCAGA  GAU                                      Uggg u
        aaag     u    c  uuug             UU   -------------------------------------A    u 


Annotation confidence Low
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Genome context
JQCY02001588.1: 1284-1428 [-]

Database links

Mature sfr-miR-10455-5p

Accession MIMAT0041776
Description Spodoptera frugiperda sfr-miR-10455-5p mature miRNA
Sequence 21 - CCCUGUUGGUCUCGGAUGU - 39
Evidence experimental
Illumina [1]

Mature sfr-miR-10455-3p

Accession MIMAT0041777
Description Spodoptera frugiperda sfr-miR-10455-3p mature miRNA
Sequence 97 - UAUAGUUAGACGUCCGAGA - 115
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 25693181
    Identification and characteristics of microRNAs from army worm, Spodoptera frugiperda cell line Sf21
    Kakumani PK, Chinnappan M, Singh AK, Malhotra P, Mukherjee SK, Bhatnagar RK
    PLoS One (2015) 10:e0116988