miRBase entry: sfr-mir-10499a-2

Stem-loop sfr-mir-10499a-2

Accession

MI0033630

Description

Spodoptera frugiperda sfr-mir-10499a-2 precursor miRNA

Sequence

gcauggggcagugCAAGGGUUUAAAACUCCAUACauguguagagucugCAUGGAGUUUCAAACUCUUGGAuugcucugugc
((((((((((((.(((((((((.((((((((......(((((...))))))))))))).))))))))).))))))))))))

Structure

            g         A        UACaug     a 
gcauggggcagu CAAGGGUUU AAACUCCA      uguag  
|||||||||||| ||||||||| ||||||||      ||||| g
cgugucucguuA GUUCUCAAA UUUGAGGU      ACguc  
            G         C        ------     u

Annotation confidence Not enough data

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Genome context

JQCY02014572.1: 230-310 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from sfr-mir-10499a-2

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature sfr-miR-10499a-5p

Accession	MIMAT0041931
Description	Spodoptera frugiperda sfr-miR-10499a-5p mature miRNA
Sequence	14 - CAAGGGUUUAAAACUCCAUAC - 34
Evidence	experimental Illumina [1]

Mature sfr-miR-10499a-3p

Accession	MIMAT0041932
Description	Spodoptera frugiperda sfr-miR-10499a-3p mature miRNA
Sequence	49 - CAUGGAGUUUCAAACUCUUGGA - 70
Evidence	experimental Illumina [1]

References

PubMed ID: 25693181
Identification and characteristics of microRNAs from army worm, Spodoptera frugiperda cell line Sf21
Kakumani PK, Chinnappan M, Singh AK, Malhotra P, Mukherjee SK, Bhatnagar RK
PLoS One (2015) 10:e0116988