Stem-loop sequence egr-mir-7b

AccessionMI0035041 (change log)
DescriptionEchinococcus granulosus miR-7b stem-loop
Literature search

1 open access papers mention egr-mir-7b
(4 sentences)

Stem-loop 
   --         u     u  a      c caua   ccu     -ga    g 
5'   uggaagacu gugau ag uuguua g    uuc   uuugu   ucau u
     ||||||||| ||||| || |||||| |    |||   |||||   ||||  
3'   accuucugg cacua uc aacaau c    aag   aaacg   agua a
   ga         -     -  -      u -ucc   --u     aag    a
Get sequence
Confidence Annotation confidence: not enough data
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Genome context
Coordinates (ASM52419v1; GCA_000524195.1) Overlapping transcripts
APAU02000006.1: 1743289-1743385 [+]
intergenic
Clustered miRNAs
< 10kb from egr-mir-7b
egr-mir-3479aAPAU02000006.1: 1737369-1737433 [-]
egr-mir-7bAPAU02000006.1: 1743289-1743385 [+]
Database links

Mature sequence egr-miR-7b-5p

Accession MIMAT0043036
Sequence

1 -  

uggaagacuugugauuagauuguu

 - 24

Get sequence
Evidence experimental; Illumina [1]

Mature sequence egr-miR-7b-3p

Accession MIMAT0043037
Sequence

77 -  

caacuaucacggucuuccaag

 - 97

Get sequence
Evidence experimental; Illumina [1]

References

1
PMID:25656283 "microRNA profiling in the zoonotic parasite Echinococcus canadensis using a high-throughput approach" Macchiaroli N, Cucher M, Zarowiecki M, Maldonado L, Kamenetzky L, Rosenzvit MC Parasit Vectors. 8:83(2015).