miRBase entry: bdo-mir-125

Stem-loop bdo-mir-125

Accession

MI0037288

Description

Bactrocera dorsalis bdo-mir-125 precursor miRNA

Literature search

2 open access papers mention bdo-mir-125
(2 sentences)

Sequence

UCCCUGAGACCCUAACUUGUGAcuuuuaacaucaguuucacaaguuuugaucuccgguau
..((.((((.(..(((((((((.....(((....))))))))))))..).)))).))...

Structure

-UC  U    C CU         cuuuu   a 
   CC GAGA C  AACUUGUGA     aac u
   || |||| |  |||||||||     |||  
   gg cucu g  uugaacacu     uug c
uau  c    a uu         -----   a

Annotation confidence Not enough data

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Genome context

scaffold00010: 2862662-2862721 [+]

Clustered miRNAs

2 other miRNAs are < 10 kb from bdo-mir-125

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature bdo-miR-125

Accession	MIMAT0045411
Description	Bactrocera dorsalis bdo-miR-125 mature miRNA
Sequence	1 - UCCCUGAGACCCUAACUUGUGA - 22
Evidence	experimental Torrent [1]

References

PubMed ID: 26438165
MicroRNAs in the oriental fruit fly, Bactrocera dorsalis: extending Drosophilid miRNA conservation to the Tephritidae
Calla B, Geib SM
BMC Genomics (2015) 16:740