miRBase entry: 26438165

MicroRNAs in the oriental fruit fly, Bactrocera dorsalis: extending Drosophilid miRNA conservation to the Tephritidae

PubMed ID 26438165
Authors Calla B, Geib SM
Journal BMC Genomics
Volume 16
Pages 740

There are 94 miRNAs associated with this paper:
Name Accession RPM Chromosome Start End Strand Confidence
bdo-mir-2c MI0037250 None scaffold00020 1019361 1019425 + -
bdo-mir-307 MI0037251 None scaffold00245 68433 68496 - -
bdo-mir-996 MI0037252 None scaffold00218 41377 41442 - -
bdo-mir-929 MI0037253 None scaffold00017 1951148 1951204 - -
bdo-mir-932 MI0037254 None scaffold00243 294689 294749 - -
bdo-mir-998 MI0037255 None scaffold00005 2326077 2326162 + -
bdo-mir-988 MI0037256 None scaffold00016 2497614 2497670 - -
bdo-mir-971 MI0037257 None scaffold00003 1400520 1400582 + -
bdo-mir-283 MI0037258 None scaffold00073 1264481 1264547 + -
bdo-mir-263a MI0037259 None scaffold00022 329546 329610 - -
bdo-mir-193 MI0037260 None scaffold00072 185513 185596 - -
bdo-mir-9b MI0037261 None scaffold00027 1320120 1320184 - -
bdo-mir-92b MI0037262 None scaffold00012 2827330 2827394 - -
bdo-mir-100 MI0037263 None scaffold00010 2862114 2862172 + -
bdo-mir-8 MI0037264 None scaffold00093 156315 156375 - -
bdo-mir-276b MI0037265 None scaffold00015 91733 91792 + -
bdo-mir-7 MI0037266 None scaffold00368 139287 139347 - -
bdo-mir-315 MI0037267 None scaffold00100 130753 130811 + -
bdo-mir-993 MI0037268 None scaffold00177 21683 21769 + -
bdo-let-7 MI0037269 None scaffold00010 2862318 2862375 + -
bdo-mir-276a MI0037270 None scaffold00015 288562 288620 + -
bdo-mir-275 MI0037271 None scaffold03687 2784 2848 - -
bdo-mir-124 MI0037272 None scaffold00080 6524 6578 - -
bdo-mir-iab-4 MI0037273 None scaffold00063 390049 390107 - -
bdo-mir-9c MI0037274 None scaffold00027 1324097 1324160 - -
bdo-mir-999 MI0037275 None scaffold00069 768722 768779 - -
bdo-mir-981 MI0037276 None scaffold00278 154316 154378 + -
bdo-mir-970 MI0037277 None scaffold00172 303671 303731 - -
bdo-mir-79 MI0037278 None scaffold00027 1321252 1321313 - -
bdo-mir-305 MI0037279 None scaffold03687 2586 2645 - -
bdo-mir-2a-1 MI0037280 None scaffold00002 2204625 2204688 - -
bdo-mir-263b MI0037281 None scaffold00044 704215 704278 - -
bdo-mir-219 MI0037282 None scaffold00126 423700 423763 - -
bdo-mir-190 MI0037283 None scaffold00086 882723 882785 - -
bdo-mir-184 MI0037284 None scaffold00128 433656 433714 + -
bdo-mir-137 MI0037285 None scaffold00025 1174638 1174698 - -
bdo-mir-13b MI0037286 None scaffold00020 1021893 1021956 + -
bdo-mir-13a MI0037287 None scaffold00073 242058 242120 + -
bdo-mir-125 MI0037288 None scaffold00010 2862662 2862721 + -
bdo-mir-1000 MI0037289 None scaffold00020 1908105 1908173 + -
bdo-mir-10 MI0037290 None scaffold00063 1439499 1439559 + -
bdo-mir-1 MI0037291 None scaffold01330 2447 2507 - -
bdo-bantam MI0037292 None scaffold00126 40554 40611 + -
bdo-mir-2b-2 MI0037293 None scaffold00022 1637400 1637461 - -
bdo-mir-2a-2 MI0037294 None scaffold00002 2204162 2204222 - -
bdo-mir-281 MI0037295 None scaffold00183 324188 324248 + -
bdo-mir-iab-8 MI0037296 None scaffold00063 390051 390110 + -
bdo-mir-5b-1 MI0037297 None scaffold00054 206689 206749 - -
bdo-mir-4 MI0037298 None scaffold00054 203559 203615 - -
bdo-mir-5a MI0037299 None scaffold00054 203235 203297 - -
bdo-mir-12 MI0037300 None scaffold00073 1266978 1267045 + -
bdo-mir-927 MI0037301 None scaffold00941 10434 10495 - -
bdo-mir-87 MI0037302 None scaffold00447 75699 75764 - -
bdo-mir-308 MI0037303 None scaffold00075 955990 956048 + -
bdo-mir-994 MI0037304 None scaffold00147 463833 463903 - -
bdo-mir-5b-2 MI0037305 None scaffold00054 204041 204101 - -
bdo-mir-316 MI0037306 None scaffold00065 1187308 1187365 - -
bdo-mir-284 MI0037307 None scaffold00001 1043663 1043741 - -
bdo-mir-282 MI0037308 None scaffold00001 5403970 5404035 - -
bdo-mir-210 MI0037309 None scaffold00084 612926 612983 - -
bdo-mir-14 MI0037310 None scaffold00236 279336 279405 - -
bdo-mir-286 MI0037311 None scaffold00054 204944 205010 - -
bdo-mir-11 MI0037312 None scaffold00005 2323679 2323747 + -
bdo-mir-252 MI0037313 None scaffold00214 97423 97492 + -
bdo-mir-995 MI0037314 None scaffold00041 1461882 1461945 + -
bdo-mir-318 MI0037315 None scaffold00147 463660 463730 - -
bdo-mir-375 MI0037316 None scaffold00122 685392 685459 - -
bdo-mir-2b-1 MI0037317 None scaffold00002 2205154 2205237 - -
bdo-mir-306 MI0037318 None scaffold00027 1321794 1321859 - -
bdo-mir-958 MI0037319 None scaffold00264 137658 137718 + -
bdo-mir-11593 MI0037320 None scaffold00003 476312 476369 + -
bdo-mir-304 MI0037321 None scaffold00073 1266554 1266618 + -
bdo-mir-11594 MI0037322 None scaffold00003 608597 608658 - -
bdo-mir-980 MI0037323 None scaffold00152 492348 492407 - -
bdo-mir-11595 MI0037324 None scaffold00155 460599 460675 + -
bdo-mir-6 MI0037325 None scaffold00054 203903 203964 - -
bdo-mir-309b MI0037326 None scaffold00054 205267 205336 - -
bdo-mir-309a MI0037327 None scaffold00054 203737 203796 - -
bdo-mir-11596 MI0037328 None scaffold01114 3904 3975 + -
bdo-mir-11597 MI0037329 None scaffold01468 5158 5244 + -
dme-mir-4 MI0000122 4306 chr2R 19661289 19661369 - High
dme-mir-5 MI0000123 4680 chr2R 19661158 19661226 - High
dme-mir-6-3 MI0000126 1200 chr2R 19660716 19660795 - High
dme-mir-276a MI0000359 51649 chr3L 10365228 10365325 + High
dme-mir-282 MI0000367 21363 chr3L 3251022 3251118 + High
dme-mir-100 MI0000378 245 chr2L 18471434 18471533 + High
dme-mir-286 MI0000380 5368 chr2R 19661422 19661521 - High
dme-mir-87 MI0000382 543 chr2L 9950418 9950516 - High
dme-let-7 MI0000416 7587 chr2L 18472034 18472111 + High
dme-mir-125 MI0000417 2646 chr2L 18472315 18472424 + High
dme-mir-309 MI0000421 2231 chr2R 19661706 19661774 - High
dme-mir-981 MI0005838 1912 chrX 1788861 1788957 - High
dme-mir-927 MI0005843 583 chrX 15965947 15966038 - High
dme-mir-137 MI0005849 94 chr2R 16065254 16065344 - High



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