Stem-loop bdo-mir-2b-1

Accession

MI0037317

Description

Bactrocera dorsalis bdo-mir-2b-1 precursor miRNA

Literature search

1 open access papers mention bdo-mir-2b-1
(4 sentences)

Sequence

uucuucaaaguggcugcgaaauguugacauuuucugcuuaaaauauauuuuugaaauucaUAUCACAGCCAGCUUUGAGGAGCG
((((((((((((((((.((.(((.......((((..................))))..))).)).)))))).))))))))))..

Structure

--          -      c  a   uugacau    ugcuuaaa 
  uucuucaaag uggcug ga aug       uuuc        a
  |||||||||| |||||| || |||       ||||         
  GAGGAGUUUC ACCGAC CU Uac       aaag        u
GC          G      A  A   -----uu    uuuuuaua 

Annotation confidence Not enough data

Genome context

scaffold00002: 2205154-2205237 [-]

Clustered miRNAs

2 other miRNAs are < 10 kb from bdo-mir-2b-1

Mature bdo-miR-2b

• Accession: MIMAT0045416
• Description: Bactrocera dorsalis bdo-miR-2b mature miRNA
• Sequence: 61 - UAUCACAGCCAGCUUUGAGGAGCG - 84
• Evidence: experimental ; Torrent [1]

References

1. PubMed ID: 26438165
   MicroRNAs in the oriental fruit fly, Bactrocera dorsalis: extending Drosophilid miRNA conservation to the Tephritidae
   Calla B, Geib SM
   BMC Genomics (2015) 16:740