Stem-loop bdo-mir-1000

Accession

MI0037289

Description

Bactrocera dorsalis bdo-mir-1000 precursor miRNA

Literature search

1 open access papers mention bdo-mir-1000
(1 sentences)

Sequence

AUAUUGUCCUGUCACAGCAGUacuguucuucucgauaugauagccuacugcugggccggggcauuaaca
.((.(((((((((.(((((((((((((...........)))))..)))))))))).))))))).))...

Structure

--A  U       -  A        --     cuuc 
   UA UGUCCUG UC CAGCAGUa  cuguu    u
   || ||||||| || ||||||||  |||||    c
   au acggggc gg gucgucau  gauag    g
aca  u       c  -        cc     uaua 

Annotation confidence Not enough data

Genome context

scaffold00020: 1908105-1908173 [+]

Mature bdo-miR-1000

• Accession: MIMAT0045412
• Description: Bactrocera dorsalis bdo-miR-1000 mature miRNA
• Sequence: 1 - AUAUUGUCCUGUCACAGCAGU - 21
• Evidence: experimental ; Torrent [1]

References

1. PubMed ID: 26438165
   MicroRNAs in the oriental fruit fly, Bactrocera dorsalis: extending Drosophilid miRNA conservation to the Tephritidae
   Calla B, Geib SM
   BMC Genomics (2015) 16:740