Stem-loop bdo-mir-6

Accession

MI0037325

Description

Bactrocera dorsalis bdo-mir-6 precursor miRNA

Literature search

1 open access papers mention bdo-mir-6
(4 sentences)

Sequence

aaaggaaugguugcagugauguaguuuuuguuuuuauuuaUAUCACAGUGGCUGUUCCUUAU
.(((((((((((((.(((((((((.............))))))))).)))))))))))))..

Structure

-a             a         uuuuu 
  aaggaaugguugc gugauguag     g
  ||||||||||||| |||||||||     u
  UUCCUUGUCGGUG CACUAUauu     u
UA             A         uauuu 

Annotation confidence Not enough data

Genome context

scaffold00054: 203903-203964 [-]

Clustered miRNAs

7 other miRNAs are < 10 kb from bdo-mir-6

Mature bdo-miR-6

• Accession: MIMAT0045446
• Description: Bactrocera dorsalis bdo-miR-6 mature miRNA
• Sequence: 41 - UAUCACAGUGGCUGUUCCUUAU - 62
• Evidence: experimental ; Torrent [1]

References

1. PubMed ID: 26438165
   MicroRNAs in the oriental fruit fly, Bactrocera dorsalis: extending Drosophilid miRNA conservation to the Tephritidae
   Calla B, Geib SM
   BMC Genomics (2015) 16:740