Stem-loop bdo-mir-100

Accession

MI0037263

Description

Bactrocera dorsalis bdo-mir-100 precursor miRNA

Literature search

1 open access papers mention bdo-mir-100
(1 sentences)

Sequence

AACCCGUAAAUCCGAACUUGUGcuguuguuuguguugcaagaccggcauuaugggaguc
..(((((((..(((..(((((((........))...)))))..)))..)))))))....

Structure

--AA       AU   AA     ---  ugu 
    CCCGUAA  CCG  CUUGU   Gc   u
    |||||||  |||  |||||   ||    
    ggguauu  ggc  gaacg   ug   g
cuga       ac   ca     uug  uuu 

Annotation confidence Not enough data

Genome context

scaffold00010: 2862114-2862172 [+]

Clustered miRNAs

2 other miRNAs are < 10 kb from bdo-mir-100

Mature bdo-miR-100

• Accession: MIMAT0045386
• Description: Bactrocera dorsalis bdo-miR-100 mature miRNA
• Sequence: 1 - AACCCGUAAAUCCGAACUUGUG - 22
• Evidence: experimental ; Torrent [1]

References

1. PubMed ID: 26438165
   MicroRNAs in the oriental fruit fly, Bactrocera dorsalis: extending Drosophilid miRNA conservation to the Tephritidae
   Calla B, Geib SM
   BMC Genomics (2015) 16:740