Stem-loop bdo-mir-309b

Accession

MI0037326

Description

Bactrocera dorsalis bdo-mir-309b precursor miRNA

Literature search

2 open access papers mention bdo-mir-309b
(2 sentences)

Sequence

cggcaaacuauauucagcuguggugucaacuccuguacaauuuucugcaUCACUGGGUAAAGUUUGUCCU
.((((((((.((((((...(((((((....................))))))))))))).))))))))..

Structure

-c        a      gcu       caacuccug 
  ggcaaacu uauuca   guggugu         u
  |||||||| ||||||   |||||||          
  CUGUUUGA AUGGGU   CACUacg         a
UC        A      ---       ucuuuuaac 

Annotation confidence Not enough data

Genome context

scaffold00054: 205267-205336 [-]

Clustered miRNAs

7 other miRNAs are < 10 kb from bdo-mir-309b

Mature bdo-miR-309b

• Accession: MIMAT0045447
• Description: Bactrocera dorsalis bdo-miR-309b mature miRNA
• Sequence: 50 - UCACUGGGUAAAGUUUGUCCU - 70
• Evidence: experimental ; Torrent [1]

References

1. PubMed ID: 26438165
   MicroRNAs in the oriental fruit fly, Bactrocera dorsalis: extending Drosophilid miRNA conservation to the Tephritidae
   Calla B, Geib SM
   BMC Genomics (2015) 16:740