Stem-loop bdo-mir-5b-1

Accession

MI0037297

Description

Bactrocera dorsalis bdo-mir-5b-1 precursor miRNA

Literature search

2 open access papers mention bdo-mir-5b-1
(8 sentences)

Sequence

aaaggaacgaucguugugguauauguauuuugaaagucuaUAUCACAGUGAUUUUCCUUGU
.((((((.(((((((((((((((.(.((((...))))))))))))))))))))))))))..

Structure

-a      c               u u    u 
  aaggaa gaucguugugguaua g auuu  
  |||||| ||||||||||||||| | |||| g
  UUCCUU UUAGUGACACUAUau c ugaa  
UG      -               - -    a 

Annotation confidence Not enough data

Genome context

scaffold00054: 206689-206749 [-]

Clustered miRNAs

7 other miRNAs are < 10 kb from bdo-mir-5b-1

Mature bdo-miR-5b

• Accession: MIMAT0045420
• Description: Bactrocera dorsalis bdo-miR-5b mature miRNA
• Sequence: 41 - UAUCACAGUGAUUUUCCUUGU - 61
• Evidence: experimental ; Torrent [1]

References

1. PubMed ID: 26438165
   MicroRNAs in the oriental fruit fly, Bactrocera dorsalis: extending Drosophilid miRNA conservation to the Tephritidae
   Calla B, Geib SM
   BMC Genomics (2015) 16:740