miRBase entry: bdo-mir-5a

Stem-loop bdo-mir-5a

Accession

MI0037299

Description

Bactrocera dorsalis bdo-mir-5a precursor miRNA

Literature search

2 open access papers mention bdo-mir-5a
(8 sentences)

Sequence

AAAGGAACGUUCGUUGUGAUAUacguacacuuuaaagaauauaucacagugauuuuccuuuau
(((((((...(((((((((((((................)))))))))))))..)))))))..

Structure

--       CGU             cguacac 
  AAAGGAA   UCGUUGUGAUAUa       u
  |||||||   |||||||||||||        
  uuuccuu   agugacacuauau       u
ua       -uu             aagaaau

Annotation confidence Low

Do you think this miRNA is real?

Genome context

scaffold00054: 203235-203297 [-]

Clustered miRNAs

7 other miRNAs are < 10 kb from bdo-mir-5a

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

References

PubMed ID: 26438165
MicroRNAs in the oriental fruit fly, Bactrocera dorsalis: extending Drosophilid miRNA conservation to the Tephritidae
Calla B, Geib SM
BMC Genomics (2015) 16:740