Stem-loop bdo-mir-5a

Accession

MI0037299

Description

Bactrocera dorsalis bdo-mir-5a precursor miRNA

Literature search

2 open access papers mention bdo-mir-5a
(8 sentences)

Sequence

AAAGGAACGUUCGUUGUGAUAUacguacacuuuaaagaauauaucacagugauuuuccuuuau
(((((((...(((((((((((((................)))))))))))))..)))))))..

Structure

--       CGU             cguacac 
  AAAGGAA   UCGUUGUGAUAUa       u
  |||||||   |||||||||||||        
  uuuccuu   agugacacuauau       u
ua       -uu             aagaaau 

Annotation confidence Not enough data

Genome context

scaffold00054: 203235-203297 [-]

Clustered miRNAs

7 other miRNAs are < 10 kb from bdo-mir-5a

Mature bdo-miR-5a

• Accession: MIMAT0045422
• Description: Bactrocera dorsalis bdo-miR-5a mature miRNA
• Sequence: 1 - AAAGGAACGUUCGUUGUGAUAU - 22
• Evidence: experimental ; Torrent [1]

References

1. PubMed ID: 26438165
   MicroRNAs in the oriental fruit fly, Bactrocera dorsalis: extending Drosophilid miRNA conservation to the Tephritidae
   Calla B, Geib SM
   BMC Genomics (2015) 16:740