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miRBase entry: bdo-mir-124
How is the hairpin structure generated?
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We have generated a dot-bracket structure for each sequence using RNAfold.
Unambiguous secondary structure.
Parsed and ASCII art drawn.
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Stem-loop
bdo-mir-124
Accession
MI0037272
Description
Bactrocera dorsalis
bdo-mir-124 precursor miRNA
Sequence
Copy Sequence
gguauccacuguaggccuauauguuauuuggucaUAAGGCACGCGGUGAAUGCCA
(((((.((((((..((((.((((.........))))))))..)))))).))))).
Structure
- c ag a uua gguau cacugu gccu uaug u ||||| |||||| |||| |||| u CCGUA GUGGCG CGGA AUac u A A CA - ugg
Annotation confidence
Low
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Genome context
scaffold00080: 6524-6578 [-]
Database links
References
PubMed ID:
26438165
MicroRNAs in the oriental fruit fly, Bactrocera dorsalis: extending Drosophilid miRNA conservation to the Tephritidae
Calla B, Geib SM
BMC Genomics (2015) 16:740