Stem-loop bdo-mir-11

Accession

MI0037312

Description

Bactrocera dorsalis bdo-mir-11 precursor miRNA

Literature search

1 open access papers mention bdo-mir-11
(2 sentences)

Sequence

cgggagcucuggcugugauuugcguuucacaaucaaauuucauuucgCAUCACAGUCUGAGUUCUUGCU
(((((((((.((((((((..((((.....................)))))))))))).)))))))))..

Structure

--         u        uu    uuucacaau 
  cgggagcuc ggcuguga  ugcg         c
  ||||||||| ||||||||  ||||         a
  GUUCUUGAG CUGACACU  ACgc         a
UC         U        --    uuuacuuua 

Annotation confidence Not enough data

Genome context

scaffold00005: 2323679-2323747 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from bdo-mir-11

Mature bdo-miR-11

• Accession: MIMAT0045434
• Description: Bactrocera dorsalis bdo-miR-11 mature miRNA
• Sequence: 48 - CAUCACAGUCUGAGUUCUUGCU - 69
• Evidence: experimental ; Torrent [1]

References

1. PubMed ID: 26438165
   MicroRNAs in the oriental fruit fly, Bactrocera dorsalis: extending Drosophilid miRNA conservation to the Tephritidae
   Calla B, Geib SM
   BMC Genomics (2015) 16:740