Stem-loop bdo-mir-309a

Accession

MI0037327

Description

Bactrocera dorsalis bdo-mir-309a precursor miRNA

Literature search

2 open access papers mention bdo-mir-309a
(2 sentences)

Sequence

ggacaaacuuuguucaguauuggugcuuguuuucugcaUCACUGGGUAAAGUUUGUCCCA
((((((((((((((((((...(((((.........)))))))))))))))))))))))..

Structure

--                  auu     uug 
  ggacaaacuuuguucagu   ggugc   u
  ||||||||||||||||||   |||||   u
  CCUGUUUGAAAUGGGUCA   CUacg   u
AC                  ---     ucu 

Annotation confidence Not enough data

Genome context

scaffold00054: 203737-203796 [-]

Clustered miRNAs

7 other miRNAs are < 10 kb from bdo-mir-309a

Mature bdo-miR-309a

• Accession: MIMAT0045448
• Description: Bactrocera dorsalis bdo-miR-309a mature miRNA
• Sequence: 39 - UCACUGGGUAAAGUUUGUCCCA - 60
• Evidence: experimental ; Torrent [1]

References

1. PubMed ID: 26438165
   MicroRNAs in the oriental fruit fly, Bactrocera dorsalis: extending Drosophilid miRNA conservation to the Tephritidae
   Calla B, Geib SM
   BMC Genomics (2015) 16:740