miRBase entry: bdo-mir-304

Stem-loop bdo-mir-304


Accession
MI0037321
Description
Bactrocera dorsalis bdo-mir-304 precursor miRNA

Literature search
1 open access papers mention bdo-mir-304
(2 sentences)

Sequence

UAAUCUCAAUUUGUAACUGUGAGcgaauucgauaugcugaacucacguugcauauggagauugcc
(((((((.((.((((((.(((((....((((......))))))))))))))).)).)))))))..

Structure
--       A  U      U     cgaa    au 
  UAAUCUC AU UGUAAC GUGAG    uucg  a
  ||||||| || |||||| |||||    ||||   
  guuagag ua acguug cacuc    aagu  u
cc       g  u      -     ----    cg 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
scaffold00073: 1266554-1266618 [+]
Clustered miRNAs
2 other miRNAs are < 10 kb from bdo-mir-304
Name Accession Chromosome Start End Strand Confidence




Database links

Mature bdo-miR-304

Accession MIMAT0045442
Description Bactrocera dorsalis bdo-miR-304 mature miRNA
Sequence 1 - UAAUCUCAAUUUGUAACUGUGAG - 23
Evidence experimental
Torrent [1]

References

  1. PubMed ID: 26438165
    MicroRNAs in the oriental fruit fly, Bactrocera dorsalis: extending Drosophilid miRNA conservation to the Tephritidae
    Calla B, Geib SM
    BMC Genomics (2015) 16:740