Stem-loop sequence mes-MIR1446b

AccessionMI0037918 (change log)
DescriptionManihot esculenta miR1446b stem-loop
Literature search

1 open access papers mention mes-MIR1446b
(2 sentences)

Stem-loop 
   --ggauuuuug    u        cu        uc c       g    cucua   ucucucaaau 
5'            gaga cuaacuuu  cugaacuc  c ccucaac gcua     gcu          u
              |||| ||||||||  ||||||||  | ||||||| ||||     |||           
3'            cucu gguugaaa  gacuugag  g ggaguug cgau     cgg          u
   guauuaaugug    c        ac        ga u       a    ucaug   uuuugcgaac
Get sequence
Confidence Annotation confidence: not enough data
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Genome context
Coordinates (Cassava4) Overlapping transcripts
scaffold01701: 706488-706623 [+]
intergenic
Clustered miRNAs
< 10kb from mes-MIR1446b
mes-MIR477gscaffold01701: 705026-705165 [+]
mes-MIR1446bscaffold01701: 706488-706623 [+]
Database links

Mature sequence mes-miR1446b

Accession MIMAT0045982
Sequence

26 -  

ugaacucucccccucaacggcu

 - 47

Get sequence
Evidence experimental; Illumina [1]

References

1
PMID:26822616 "High-resolution identification and abundance profiling of cassava (Manihot esculenta Crantz) microRNAs" Khatabi B, Arikit S, Xia R, Winter S, Oumar D, Mongomake K, Meyers BC, Fondong VN BMC Genomics. 17:85(2016).