Stem-loop sequence mes-MIR11892

Accession

MI0037924 (change log)

Description

Manihot esculenta miR11892 stem-loop

Literature search

1 open access papers mention mes-MIR11892
(8 sentences)

Stem-loop

   -      ---g      uc            u          u  cugg     g 
5'  caaugu    cuuuug  aucucaaccuug gucagauuuu gu    uucuc c
    ||||||    ||||||  |||||||||||| |||||||||| ||    |||||  
3'  guuacg    gaaaac  uggaguuggaac cagucuaaaa ca    aaggg a
   u      auua      ga            u          -  ---a     a 

Confidence

Annotation confidence: not enough data

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Genome context

• Coordinates (Cassava4): scaffold09889: 5902-6005 [-]
• Overlapping transcripts:

  intergenic

Database links

• miRBase Tracker:MI0037924

Mature sequence mes-miR11892

• Accession: MIMAT0045988
• Sequence: 11 - uugucaucucaaccuuguguc - 31
• Evidence: experimental; Illumina [1]

References

1. PMID:26822616 "High-resolution identification and abundance profiling of cassava (Manihot esculenta Crantz) microRNAs" Khatabi B, Arikit S, Xia R, Winter S, Oumar D, Mongomake K, Meyers BC, Fondong VN BMC Genomics. 17:85(2016).