miRBase entry: mes-MIR11892

Stem-loop mes-MIR11892


Accession
MI0037924
Description
Manihot esculenta mes-MIR11892 precursor miRNA

Literature search
1 open access papers mention mes-MIR11892
(8 sentences)

Sequence

caaugugcuuUUGUCAUCUCAACCUUGUGUCagauuuuugucugguucucgcaagggaaaacaaaaucugacucaagguugagguagcaaaagauuagcauugu
((((((.(((((((.((((((((((((.((((((((((.((....(((((....))))).)))))))))))).)))))))))))).)))))))....)))))).

Structure
-      ---g       C            U          u  cugg     g 
 caaugu    cuuUUGU AUCUCAACCUUG GUCagauuuu gu    uucuc c
 ||||||    ||||||| |||||||||||| |||||||||| ||    |||||  
 guuacg    gaaaacg uggaguuggaac cagucuaaaa ca    aaggg a
u      auua       a            u          -  ---a     a 


Annotation confidence Not enough data
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Genome context
scaffold09889: 5902-6005 [-]

Database links

Mature mes-miR11892

Accession MIMAT0045988
Description Manihot esculenta mes-miR11892 mature miRNA
Sequence 11 - UUGUCAUCUCAACCUUGUGUC - 31
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 26822616
    High-resolution identification and abundance profiling of cassava (Manihot esculenta Crantz) microRNAs
    Khatabi B, Arikit S, Xia R, Winter S, Oumar D, Mongomake K, Meyers BC, Fondong VN
    BMC Genomics (2016) 17:85