Stem-loop sequence pte-mir-125b

Accession

MI0038020 (change log)

Description

Parasteatoda tepidariorum miR-125b stem-loop

Literature search

1 open access papers mention pte-mir-125b
(4 sentences)

Stem-loop

   uc        c          a    uuc 
5'   ccugagac cuaacuugug ugga   a
     |||||||| |||||||||| ||||    
3'   gggcucug gauugaacac gcuu   u
   cc        u          -    cgu 

Confidence

Annotation confidence: not enough data

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Genome context

• Coordinates: Scf5bK3_97: 8375232-8375290 [+]
• Overlapping transcripts:

  intergenic

Database links

• miRBase Tracker:MI0038020

Mature sequence pte-miR-125b-5p

• Accession: MIMAT0046094
• Sequence: 1 - ucccugagacccuaacuugug - 21
• Evidence: experimental; Illumina [1]

Mature sequence pte-miR-125b-3p

• Accession: MIMAT0046095
• Sequence: 41 - caaguuagugucucgggcc - 59
• Evidence: experimental; Illumina [1]

References

1. PMID:27324919 "Pervasive microRNA Duplication in Chelicerates: Insights from the Embryonic microRNA Repertoire of the Spider Parasteatoda tepidariorum" Leite DJ, Ninova M, Hilbrant M, Arif S, Griffiths-Jones S, Ronshaugen M, McGregor AP Genome Biol Evol. 8:2133-2144(2016).