miRBase entry: 27324919

Pervasive microRNA Duplication in Chelicerates: Insights from the Embryonic microRNA Repertoire of the Spider Parasteatoda tepidariorum

PubMed ID 27324919
Authors Leite DJ, Ninova M, Hilbrant M, Arif S, Griffiths-Jones S, Ronshaugen M, McGregor AP
Journal Genome Biol Evol
Volume 8
Pages 2133-2144

There are 178 miRNAs associated with this paper:
Name Accession RPM Chromosome Start End Strand Confidence
pte-bantam MI0038009 None Scf5bK3_3958 148742 148804 + -
pte-iab-4-1 MI0038010 None Scf5bK3_497 896331 896391 - -
pte-iab-4-2 MI0038011 None Scf5bK3_833 1315213 1315270 - -
pte-iab-8-1 MI0038012 None Scf5bK3_497 896333 896393 + -
pte-iab-8-2 MI0038013 None Scf5bK3_833 1315215 1315272 + -
pte-let-7 MI0038014 None Scf5bK3_446 4924728 4924796 + -
pte-mir-1 MI0038015 None Scf5bK3_269 5291341 5291402 + -
pte-mir-10 MI0038016 None Scf5bK3_497 2682407 2682465 + -
pte-mir-100a MI0038017 None Scf5bK3_446 4913478 4913536 + -
pte-mir-100b MI0038018 None Scf5bK3_97 8286326 8286386 + -
pte-mir-125a MI0038019 None Scf5bK3_446 4938741 4938797 + -
pte-mir-125b MI0038020 None Scf5bK3_97 8375232 8375290 + -
pte-mir-184-1 MI0038021 None Scf5bK3_6609 572772 572829 - -
pte-mir-184-2 MI0038022 None Scf5bK3_3590 912854 912916 + -
pte-mir-190 MI0038023 None Scf5bK3_485 4297126 4297185 - -
pte-mir-193a MI0038024 None Scf5bK3_535 370440 370502 + -
pte-mir-193b MI0038025 None Scf5bK3_1700 847059 847114 - -
pte-mir-210 MI0038026 None Scf5bK3_925 2240834 2240891 + -
pte-mir-263a MI0038027 None Scf5bK3_537.1 22595157 22595215 + -
pte-mir-263b MI0038028 None Scf5bK3_537.1 22563773 22563832 + -
pte-mir-275 MI0038029 None Scf5bK3_1778 109272 109339 + -
pte-mir-276-1 MI0038030 None Scf5bK3_66.1 428527 428585 - -
pte-mir-276-2 MI0038031 None Scf5bK3_1129.1 682519 682577 + -
pte-mir-277a MI0038032 None Scf5bK3_265 8587537 8587599 + -
pte-mir-277b MI0038033 None Scf5bK3_269 1826846 1826899 + -
pte-mir-278a MI0038034 None Scf5bK3_193 2756450 2756508 + -
pte-mir-278b MI0038035 None Scf5bK3_214 1515459 1515521 - -
pte-mir-35a MI0038036 None Scf5bK3_786 6401680 6401736 - -
pte-mir-279 MI0038037 None Scf5bK3_238.1 754887 754947 - -
pte-mir-35b MI0038038 None Scf5bK3_15357 253 309 + -
pte-mir-281 MI0038039 None Scf5bK3_34 222859 222918 + -
pte-mir-29a MI0038040 None Scf5bK3_306 7670891 7670950 + -
pte-mir-29b MI0038041 None Scf5bK3_306 7670776 7670838 + -
pte-mir-2a MI0038042 None Scf5bK3_595 726238 726302 - -
pte-mir-2b-1 MI0038043 None Scf5bK3_595 726122 726186 - -
pte-mir-2b-2 MI0038044 None Scf5bK3_5995 359128 359188 + -
pte-mir-2c MI0038045 None Scf5bK3_5995 356792 356849 + -
pte-mir-2d MI0038046 None Scf5bK3_5995 359448 359508 + -
pte-mir-2e MI0038047 None Scf5bK3_5995 356661 356719 + -
pte-mir-2f MI0038048 None Scf5bK3_595 730975 731038 - -
pte-mir-2g-1 MI0038049 None Scf5bK3_5995 359336 359391 + -
pte-mir-2g-2 MI0038050 None Scf5bK3_5995 359230 359289 + -
pte-mir-11938 MI0038051 None Scf5bK3_479 10328885 10328945 + -
pte-mir-305 MI0038052 None Scf5bK3_1778 111273 111334 + -
pte-mir-315 MI0038053 None Scf5bK3_211 7915234 7915291 + -
pte-mir-317 MI0038054 None Scf5bK3_269 1823433 1823497 + -
pte-mir-34 MI0038055 None Scf5bK3_269 1846325 1846383 + -
pte-mir-35c MI0038056 None Scf5bK3_786 6403218 6403274 - -
pte-mir-35o-1 MI0038057 None Scf5bK3_73 4659837 4659893 + -
pte-mir-35q-1 MI0038058 None Scf5bK3_3068 17321 17380 + -
pte-mir-35t MI0038059 None Scf5bK3_73 4579946 4580001 - -
pte-mir-35n-1 MI0038060 None Scf5bK3_3068 16552 16610 + -
pte-mir-35n-2 MI0038061 None Scf5bK3_9832 784 842 - -
pte-mir-35k MI0038062 None Scf5bK3_786 6359629 6359684 - -
pte-mir-35d MI0038063 None Scf5bK3_786 6402310 6402366 - -
pte-mir-35j-1 MI0038064 None Scf5bK3_3068 12165 12221 + -
pte-mir-35j-2 MI0038065 None Scf5bK3_786 6359442 6359498 - -
pte-mir-35e-1 MI0038066 None Scf5bK3_786 6359147 6359203 - -
pte-mir-35f MI0038067 None Scf5bK3_786 6405166 6405222 - -
pte-mir-35g MI0038068 None Scf5bK3_786 6402613 6402671 - -
pte-mir-35h MI0038069 None Scf5bK3_786 6403027 6403083 - -
pte-mir-35i MI0038070 None Scf5bK3_786 6405550 6405606 - -
pte-mir-35s MI0038071 None Scf5bK3_238.1 746981 747041 - -
pte-mir-35m MI0038072 None Scf5bK3_73 4580855 4580911 - -
pte-mir-35z MI0038073 None Scf5bK3_786 6406386 6406445 - -
pte-mir-35u MI0038074 None Scf5bK3_73 4583750 4583806 - -
pte-mir-35e-2 MI0038075 None Scf5bK3_3068 12460 12516 + -
pte-mir-35p MI0038076 None Scf5bK3_3068 10790 10846 + -
pte-mir-35w MI0038077 None Scf5bK3_73 4665401 4665457 + -
pte-mir-35l MI0038078 None Scf5bK3_73 4662657 4662713 + -
pte-mir-35x MI0038079 None Scf5bK3_73 4589896 4589952 - -
pte-mir-35y MI0038080 None Scf5bK3_73 4588113 4588169 - -
pte-mir-35v MI0038081 None Scf5bK3_73 4584309 4584365 - -
pte-mir-35r-1 MI0038082 None Scf5bK3_13582 1978 2039 - -
pte-mir-35r-2 MI0038083 None Scf5bK3_3068 20244 20305 + -
pte-mir-35r-3 MI0038084 None Scf5bK3_786 6356599 6356660 - -
pte-mir-35q-2 MI0038085 None Scf5bK3_9832 27 87 - -
pte-mir-35o-2 MI0038086 None Scf5bK3_73 4588710 4588766 - -
pte-mir-35q-3 MI0038087 None None None -
pte-mir-375-1 MI0038088 None Scf5bK3_2865 552797 552854 - -
pte-mir-375-2 MI0038089 None Scf5bK3_562 595112 595167 - -
pte-mir-3931 MI0038090 None Scf5bK3_112 4859479 4859537 + -
pte-mir-7 MI0038091 None Scf5bK3_895 4019555 4019615 - -
pte-mir-71-1 MI0038092 None Scf5bK3_5995 356520 356577 + -
pte-mir-71-2 MI0038093 None Scf5bK3_595 731101 731161 - -
pte-mir-745 MI0038094 None Scf5bK3_603 1331700 1331758 - -
pte-mir-8 MI0038095 None Scf5bK3_12704 8666 8731 + -
pte-mir-87a MI0038096 None Scf5bK3_2865 1396953 1397013 + -
pte-mir-87b MI0038097 None Scf5bK3_2865 1396007 1396068 + -
pte-mir-87c MI0038098 None Scf5bK3_290 2040734 2040793 - -
pte-mir-9 MI0038099 None Scf5bK3_1520 2028464 2028523 + -
pte-mir-92a MI0038100 None Scf5bK3_416 86062 86123 - -
pte-mir-92b-1 MI0038101 None Scf5bK3_2017 1656729 1656788 - -
pte-mir-92c MI0038102 None Scf5bK3_50 6409767 6409829 + -
pte-mir-92b-2 MI0038103 None Scf5bK3_2782 255811 255869 - -
pte-mir-96 MI0038104 None Scf5bK3_537.1 22595291 22595350 + -
pte-mir-981 MI0038105 None Scf5bK3_303 3350430 3350487 - -
pte-mir-993a MI0038106 None Scf5bK3_142 3107379 3107441 + -
pte-mir-993b-1 MI0038107 None Scf5bK3_833 3580170 3580234 - -
pte-mir-993b-2 MI0038108 None Scf5bK3_6239 334437 334503 + -
pte-mir-11939 MI0038109 None Scf5bK3_32 835993 836053 + -
pte-mir-11940 MI0038110 None Scf5bK3_44 82126 82180 + -
pte-mir-11941 MI0038111 None Scf5bK3_479 13067621 13067681 - -
pte-mir-11942a MI0038112 None Scf5bK3_165.1 1758563 1758624 - -
pte-mir-11942b MI0038113 None Scf5bK3_265 1038429 1038484 + -
pte-mir-11942c MI0038114 None Scf5bK3_50 6968144 6968202 - -
pte-mir-11942d MI0038115 None Scf5bK3_50 6967991 6968049 - -
pte-mir-11943 MI0038116 None Scf5bK3_15205 103124 103181 - -
pte-mir-14 MI0038117 None Scf5bK3_774.1 775553 775611 - -
pte-mir-11944 MI0038118 None Scf5bK3_265 5658206 5658265 + -
pte-mir-11945 MI0038119 None Scf5bK3_524 1134778 1134838 - -
pte-mir-11946 MI0038120 None Scf5bK3_332 4028663 4028720 - -
pte-mir-11947a-1 MI0038121 None Scf5bK3_211.1 97416 97474 + -
pte-mir-11947a-2 MI0038122 None Scf5bK3_1054 3732459 3732517 - -
pte-mir-11948 MI0038123 None Scf5bK3_332 2190701 2190759 + -
pte-mir-11949 MI0038124 None Scf5bK3_2892.1 156726 156781 + -
pte-mir-11950 MI0038125 None Scf5bK3_786 6403352 6403408 - -
pte-mir-11951a MI0038126 None Scf5bK3_537.1 13300262 13300319 - -
pte-mir-11951b MI0038127 None Scf5bK3_537.1 13305839 13305897 - -
pte-mir-11952 MI0038128 None Scf5bK3_230 1499973 1500034 + -
pte-mir-3477 MI0038129 None Scf5bK3_133 1228367 1228426 + -
pte-mir-11953 MI0038130 None Scf5bK3_962 1724287 1724339 + -
pte-mir-11954 MI0038131 None Scf5bK3_599 2934827 2934897 + -
pte-mir-11955 MI0038132 None Scf5bK3_211 12539993 12540045 - -
pte-mir-11956 MI0038133 None Scf5bK3_268 537859 537932 - -
pte-mir-11947b-1 MI0038134 None Scf5bK3_40 1005220 1005276 + -
pte-mir-11947b-2 MI0038135 None Scf5bK3_44 6393863 6393919 + -
pte-mir-11957 MI0038136 None Scf5bK3_44 6393498 6393556 + -
pte-mir-11958 MI0038137 None Scf5bK3_230 10866971 10867025 - -
pte-mir-11959-1 MI0038138 None Scf5bK3_230 10895496 10895550 - -
pte-mir-11959-2 MI0038139 None Scf5bK3_230 10927440 10927494 + -
pte-mir-11960 MI0038140 None Scf5bK3_112 1037640 1037689 - -
pte-mir-11961a MI0038141 None Scf5bK3_2297 44299 44359 + -
pte-mir-11961b MI0038142 None Scf5bK3_2297 46907 46967 + -
pte-mir-11961c MI0038143 None Scf5bK3_2297 45051 45112 + -
pte-mir-11962a MI0038144 None Scf5bK3_265 10546954 10547012 + -
pte-mir-11962b MI0038145 None Scf5bK3_265 10550016 10550074 + -
pte-mir-11965-3 MI0038146 None Scf5bK3_1465 191822 191879 - -
pte-mir-11963a MI0038147 None Scf5bK3_75 56414 56472 - -
pte-mir-11963b-1 MI0038148 None Scf5bK3_126 4356179 4356238 + -
pte-mir-11963b-2 MI0038149 None Scf5bK3_691 708742 708802 - -
pte-mir-11964 MI0038150 None Scf5bK3_169 3166310 3166369 - -
pte-mir-11965-1 MI0038151 None Scf5bK3_401 1572416 1572467 + -
pte-mir-11965-2 MI0038152 None Scf5bK3_401 1568889 1568940 - -
pte-mir-11966 MI0038153 None Scf5bK3_465 3479204 3479265 + -
pte-mir-11967 MI0038154 None Scf5bK3_2892.1 209561 209618 + -
pte-mir-11968-1 MI0038155 None Scf5bK3_75 1317191 1317253 - -
pte-mir-11968-2 MI0038156 None Scf5bK3_235 5762865 5762927 + -
dme-mir-2a-1 MI0000117 11749 chr2L 19569897 19569972 - High
dme-mir-2a-2 MI0000118 16640 chr2L 19569490 19569561 - High
dme-mir-2b-1 MI0000119 9716 chr2L 8258616 8258692 - High
dme-mir-2b-2 MI0000120 10189 chr2L 19570182 19570264 - High
dme-mir-8 MI0000128 57465 chr2R 16831432 16831518 + High
dme-mir-10 MI0000130 6448 chr3R 6809506 6809582 - High
dme-mir-14 MI0000136 52805 chr2R 9553762 9553824 + High
dme-mir-275 MI0000356 3405 chr2L 7425795 7425892 + High
dme-mir-92a MI0000357 7392 chr3R 25646506 25646600 + High
dme-mir-219 MI0000358 256 chr3L 17315006 17315105 + High
dme-mir-276a MI0000359 51649 chr3L 10365228 10365325 + High
dme-mir-133 MI0000362 1370 chr2L 20616617 20616714 + High
dme-mir-279 MI0000363 14159 chr3R 29215585 29215684 + High
dme-mir-33 MI0000364 5938 chr3L 19797961 19798059 + High
dme-mir-281-1 MI0000366 2379 chr2R 12170373 12170462 - High
dme-mir-282 MI0000367 21363 chr3L 3251022 3251118 + High
dme-mir-281-2 MI0000370 12674 chr2R 12170153 12170244 - High
dme-mir-124 MI0000373 23619 chr2L 17566370 17566469 + High
dme-mir-276b MI0000375 14614 chr3L 10319785 10319883 + High
dme-mir-100 MI0000378 245 chr2L 18471434 18471533 + High
dme-mir-31b MI0000410 1314 chrX 8993305 8993431 - High
dme-mir-305 MI0000412 12557 chr2L 7425972 7426044 + High
dme-let-7 MI0000416 7587 chr2L 18472034 18472111 + High
dme-mir-125 MI0000417 2646 chr2L 18472315 18472424 + High
dme-mir-31a MI0000420 7133 chr2R 17783795 17783886 - High
dme-mir-2c MI0000431 2932 chr3R 15417744 15417845 - High
dme-mir-193 MI0005809 1103 chr3L 21574014 21574121 + High
dme-mir-965 MI0005821 3072 chr2L 243035 243141 - High
dme-mir-981 MI0005838 1912 chrX 1788861 1788957 - High
dme-mir-137 MI0005849 94 chr2R 16065254 16065344 - High



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