Stem-loop pte-mir-993b-2

Accession

MI0038108

Description

Parasteatoda tepidariorum pte-mir-993b-2 precursor miRNA

Literature search

2 open access papers mention pte-mir-993b-2
(2 sentences)

Sequence

1470 reads, 104.0 reads per million, 9 experiments

CUACCCUGUAGAUCCGGGCUUUUGUaguuugugaauagcauucaGAAGCUCGUAUUUACAGGUAUCU
....(((((((((.((((((((((.....(((.....)))..)))))))))).))))))))).....

Structure

-CUAC         C          Uaguu   g 
     CCUGUAGAU CGGGCUUUUG     ugu a
     ||||||||| ||||||||||     ||| a
     GGACAUUUA GCUCGAAGac     acg u
UCUAU         U          ---uu   a 

Annotation confidence High

Genome context

Scf5bK3_6239: 334437-334503 [+]

Mature pte-miR-993b-5p

• Accession: MIMAT0046245
• Description: Parasteatoda tepidariorum pte-miR-993b-5p mature miRNA
• Sequence: 1 - CUACCCUGUAGAUCCGGGCUUUUGU - 25
• Evidence: experimental ; Illumina [1]

Mature pte-miR-993b-2-3p

• Accession: MIMAT0046247
• Description: Parasteatoda tepidariorum pte-miR-993b-2-3p mature miRNA
• Sequence: 45 - GAAGCUCGUAUUUACAGGUAUCU - 67
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 27324919
   Pervasive microRNA Duplication in Chelicerates: Insights from the Embryonic microRNA Repertoire of the Spider Parasteatoda tepidariorum
   Leite DJ, Ninova M, Hilbrant M, Arif S, Griffiths-Jones S, Ronshaugen M, McGregor AP
   Genome Biol Evol (2016) 8:2133-2144