Stem-loop pte-mir-100b

Accession

MI0038018

Description

Parasteatoda tepidariorum pte-mir-100b precursor miRNA

Literature search

1 open access papers mention pte-mir-100b
(5 sentences)

Sequence

AACCCGUAGAUCCGAACUUGUGuccuuuguagaccucccACAAGCUCGCCUCUACGGGUCU
.(((((((((..(((.((((((................)))))).)))..)))))))))..

Structure

-A         UC   A      uccuuug 
  ACCCGUAGA  CGA CUUGUG       u
  |||||||||  ||| ||||||        
  UGGGCAUCU  GCU GAACAc       a
UC         CC   C      ccuccag 

Annotation confidence Not enough data

Genome context

Scf5bK3_97: 8286326-8286386 [+]

Mature pte-miR-100b-5p

• Accession: MIMAT0046090
• Description: Parasteatoda tepidariorum pte-miR-100b-5p mature miRNA
• Sequence: 1 - AACCCGUAGAUCCGAACUUGUG - 22
• Evidence: experimental ; Illumina [1]

Mature pte-miR-100b-3p

• Accession: MIMAT0046091
• Description: Parasteatoda tepidariorum pte-miR-100b-3p mature miRNA
• Sequence: 40 - ACAAGCUCGCCUCUACGGGUCU - 61
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 27324919
   Pervasive microRNA Duplication in Chelicerates: Insights from the Embryonic microRNA Repertoire of the Spider Parasteatoda tepidariorum
   Leite DJ, Ninova M, Hilbrant M, Arif S, Griffiths-Jones S, Ronshaugen M, McGregor AP
   Genome Biol Evol (2016) 8:2133-2144