Stem-loop pte-mir-11964

Accession

MI0038150

Description

Parasteatoda tepidariorum pte-mir-11964 precursor miRNA

Sequence

2333 reads, 245.0 reads per million, 10 experiments

AGAUAAAUGUAUAUCUGGUCUUGugaaauuaauaaucaUGACUAGAUAUUCCAUUUAUCU
(((((((((.((((((((((..((((.........))))))))))))))..)))))))))

Structure

         -U          UU    aau 
AGAUAAAUG  AUAUCUGGUC  Guga   u
|||||||||  ||||||||||  ||||   a
UCUAUUUAC  UAUAGAUCAG  Uacu   a
         CU          --    aau 

Annotation confidence High

Genome context

Scf5bK3_169: 3166310-3166369 [-]

Mature pte-miR-11964-5p

• Accession: MIMAT0046322
• Description: Parasteatoda tepidariorum pte-miR-11964-5p mature miRNA
• Sequence: 1 - AGAUAAAUGUAUAUCUGGUCUUG - 23
• Evidence: experimental ; Illumina [1]

Mature pte-miR-11964-3p

• Accession: MIMAT0046323
• Description: Parasteatoda tepidariorum pte-miR-11964-3p mature miRNA
• Sequence: 39 - UGACUAGAUAUUCCAUUUAUCU - 60
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 27324919
   Pervasive microRNA Duplication in Chelicerates: Insights from the Embryonic microRNA Repertoire of the Spider Parasteatoda tepidariorum
   Leite DJ, Ninova M, Hilbrant M, Arif S, Griffiths-Jones S, Ronshaugen M, McGregor AP
   Genome Biol Evol (2016) 8:2133-2144