Stem-loop pte-mir-125b

Accession

MI0038020

Description

Parasteatoda tepidariorum pte-mir-125b precursor miRNA

Literature search

1 open access papers mention pte-mir-125b
(4 sentences)

Sequence

UCCCUGAGACCCUAACUUGUGauggauucauugcuucgcaCAAGUUAGUGUCUCGGGCC
..((((((((.((((((((((.((((........)))))))))))))).))))))))..

Structure

UC        C          a    uuc 
  CCUGAGAC CUAACUUGUG ugga   a
  |||||||| |||||||||| ||||    
  GGGCUCUG GAUUGAACac gcuu   u
CC        U          -    cgu 

Annotation confidence Not enough data

Genome context

Scf5bK3_97: 8375232-8375290 [+]

Mature pte-miR-125b-5p

• Accession: MIMAT0046094
• Description: Parasteatoda tepidariorum pte-miR-125b-5p mature miRNA
• Sequence: 1 - UCCCUGAGACCCUAACUUGUG - 21
• Evidence: experimental ; Illumina [1]

Mature pte-miR-125b-3p

• Accession: MIMAT0046095
• Description: Parasteatoda tepidariorum pte-miR-125b-3p mature miRNA
• Sequence: 41 - CAAGUUAGUGUCUCGGGCC - 59
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 27324919
   Pervasive microRNA Duplication in Chelicerates: Insights from the Embryonic microRNA Repertoire of the Spider Parasteatoda tepidariorum
   Leite DJ, Ninova M, Hilbrant M, Arif S, Griffiths-Jones S, Ronshaugen M, McGregor AP
   Genome Biol Evol (2016) 8:2133-2144