Stem-loop pte-mir-35r-1

Accession

MI0038082

Description

Parasteatoda tepidariorum pte-mir-35r-1 precursor miRNA

Sequence

20779 reads, 1267.0 reads per million, 10 experiments

AGAAAUUUUUCAUCCCAGUUAAUUUuauuuuugaauuaaaUCACUGGGAGGAAAGUUUCUAU
(((((((((((.(((((((((((((.......))))))....))))))))))))))))))..

Structure

--           A       ----      ua 
  AGAAAUUUUUC UCCCAGU    UAAUUU  u
  ||||||||||| |||||||    ||||||  u
  UCUUUGAAAGG AGGGUCA    auuaag  u
UA           -       CUaa      uu 

Annotation confidence High

Genome context

Scf5bK3_13582: 1978-2039 [-]

Mature pte-miR-35r-5p

• Accession: MIMAT0046208
• Description: Parasteatoda tepidariorum pte-miR-35r-5p mature miRNA
• Sequence: 1 - AGAAAUUUUUCAUCCCAGUUAAUUU - 25
• Evidence: experimental ; Illumina [1]

Mature pte-miR-35r-3p

• Accession: MIMAT0046209
• Description: Parasteatoda tepidariorum pte-miR-35r-3p mature miRNA
• Sequence: 41 - UCACUGGGAGGAAAGUUUCUAU - 62
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 27324919
   Pervasive microRNA Duplication in Chelicerates: Insights from the Embryonic microRNA Repertoire of the Spider Parasteatoda tepidariorum
   Leite DJ, Ninova M, Hilbrant M, Arif S, Griffiths-Jones S, Ronshaugen M, McGregor AP
   Genome Biol Evol (2016) 8:2133-2144