Stem-loop pte-mir-993b-1

Accession

MI0038107

Description

Parasteatoda tepidariorum pte-mir-993b-1 precursor miRNA

Literature search

2 open access papers mention pte-mir-993b-1
(2 sentences)

Sequence

29962 reads, 1860.0 reads per million, 10 experiments

CUACCCUGUAGAUCCGGGCUUUUGUagacugcuuagcauucaGAAGCUCGUCUCUACAGGUAUCU
....((((((((..((((((((((.....(((...)))..))))))))))..)))))))).....

Structure

-CUAC        UC          Uagac   u 
     CCUGUAGA  CGGGCUUUUG     ugc  
     ||||||||  ||||||||||     ||| u
     GGACAUCU  GCUCGAAGac     acg  
UCUAU        CU          ---uu   a 

Annotation confidence High

Genome context

Scf5bK3_833: 3580170-3580234 [-]

Mature pte-miR-993b-5p

• Accession: MIMAT0046245
• Description: Parasteatoda tepidariorum pte-miR-993b-5p mature miRNA
• Sequence: 1 - CUACCCUGUAGAUCCGGGCUUUUGU - 25
• Evidence: experimental ; Illumina [1]

Mature pte-miR-993b-3p

• Accession: MIMAT0046246
• Description: Parasteatoda tepidariorum pte-miR-993b-3p mature miRNA
• Sequence: 43 - GAAGCUCGUCUCUACAGGUAUCU - 65
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 27324919
   Pervasive microRNA Duplication in Chelicerates: Insights from the Embryonic microRNA Repertoire of the Spider Parasteatoda tepidariorum
   Leite DJ, Ninova M, Hilbrant M, Arif S, Griffiths-Jones S, Ronshaugen M, McGregor AP
   Genome Biol Evol (2016) 8:2133-2144