Stem-loop pte-mir-11951a

Accession

MI0038126

Description

Parasteatoda tepidariorum pte-mir-11951a precursor miRNA

Literature search

1 open access papers mention pte-mir-11951a
(1 sentences)

Sequence

AAAGCUCUUGGGAAAUUAUGUUcuuuauuugcguaaCAUGUUUUCUCCAGAGCUUAUC
.(((((((.((((((.(((((((.........).)))))).)))))).)))))))...

Structure

--A       U      U      - uuu 
   AAGCUCU GGGAAA UAUGUU c   a
   ||||||| |||||| |||||| |   u
   UUCGAGA CUCUUU GUACaa g   u
CUA       C      U      u cgu 

Annotation confidence Not enough data

Genome context

Scf5bK3_537.1: 13300262-13300319 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from pte-mir-11951a

Mature pte-miR-11951a-5p

• Accession: MIMAT0046280
• Description: Parasteatoda tepidariorum pte-miR-11951a-5p mature miRNA
• Sequence: 1 - AAAGCUCUUGGGAAAUUAUGUU - 22
• Evidence: experimental ; Illumina [1]

Mature pte-miR-11951a-3p

• Accession: MIMAT0046281
• Description: Parasteatoda tepidariorum pte-miR-11951a-3p mature miRNA
• Sequence: 37 - CAUGUUUUCUCCAGAGCUUAUC - 58
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 27324919
   Pervasive microRNA Duplication in Chelicerates: Insights from the Embryonic microRNA Repertoire of the Spider Parasteatoda tepidariorum
   Leite DJ, Ninova M, Hilbrant M, Arif S, Griffiths-Jones S, Ronshaugen M, McGregor AP
   Genome Biol Evol (2016) 8:2133-2144