Stem-loop pte-mir-125a

Accession

MI0038019

Description

Parasteatoda tepidariorum pte-mir-125a precursor miRNA

Literature search

1 open access papers mention pte-mir-125a
(4 sentences)

Sequence

UCCCUGAGACCCUAACUUGCGAuggcccgggucucCCAGGUUAGAUUCUCAGGUUUU
..(((((((..((((((((.((.(((....))))).))))))))..)))))))....

Structure

--UC       CC        C  u   c 
    CCUGAGA  CUAACUUG GA ggc c
    |||||||  |||||||| || |||  
    GGACUCU  GAUUGGAC cu cug g
UUUU       UA        C  -   g 

Annotation confidence Not enough data

Genome context

Scf5bK3_446: 4938741-4938797 [+]

Mature pte-miR-125a-5p

• Accession: MIMAT0046092
• Description: Parasteatoda tepidariorum pte-miR-125a-5p mature miRNA
• Sequence: 1 - UCCCUGAGACCCUAACUUGCGA - 22
• Evidence: experimental ; Illumina [1]

Mature pte-miR-125a-3p

• Accession: MIMAT0046093
• Description: Parasteatoda tepidariorum pte-miR-125a-3p mature miRNA
• Sequence: 36 - CCAGGUUAGAUUCUCAGGUUUU - 57
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 27324919
   Pervasive microRNA Duplication in Chelicerates: Insights from the Embryonic microRNA Repertoire of the Spider Parasteatoda tepidariorum
   Leite DJ, Ninova M, Hilbrant M, Arif S, Griffiths-Jones S, Ronshaugen M, McGregor AP
   Genome Biol Evol (2016) 8:2133-2144