Stem-loop pte-mir-35a

Accession

MI0038036

Description

Parasteatoda tepidariorum pte-mir-35a precursor miRNA

Sequence

GCAAGUUUUUCACCUUGGUUAUUuauauuuguuaaUCACCGGGUGGAAAAUUUGAGC
.((((((((((((((((((((...........))))))..))))))))))))))...

Structure

--G              --      UUua 
   CAAGUUUUUCACCU  UGGUUA    u
   ||||||||||||||  ||||||    a
   GUUUAAAAGGUGGG  ACUaau    u
CGA              CC      uguu 

Annotation confidence Not enough data

Genome context

Scf5bK3_786: 6401680-6401736 [-]

Clustered miRNAs

8 other miRNAs are < 10 kb from pte-mir-35a

Mature pte-miR-35a-5p

• Accession: MIMAT0046124
• Description: Parasteatoda tepidariorum pte-miR-35a-5p mature miRNA
• Sequence: 1 - GCAAGUUUUUCACCUUGGUUAUU - 23
• Evidence: experimental ; Illumina [1]

Mature pte-miR-35a-3p

• Accession: MIMAT0046125
• Description: Parasteatoda tepidariorum pte-miR-35a-3p mature miRNA
• Sequence: 36 - UCACCGGGUGGAAAAUUUGAGC - 57
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 27324919
   Pervasive microRNA Duplication in Chelicerates: Insights from the Embryonic microRNA Repertoire of the Spider Parasteatoda tepidariorum
   Leite DJ, Ninova M, Hilbrant M, Arif S, Griffiths-Jones S, Ronshaugen M, McGregor AP
   Genome Biol Evol (2016) 8:2133-2144