Stem-loop sequence pte-mir-8

Accession

MI0038095 (change log)

Description

Parasteatoda tepidariorum miR-8 stem-loop

Literature search

1 open access papers mention pte-mir-8
(1 sentences)

Stem-loop

   --      -   a             uc   u g 
5'   caucuu acc ggcaguauuagag  aau u a
     |||||| ||| |||||||||||||  ||| |  
3'   guagaa ugg cugucauaaucuu  uug a a
   cu      a   a             -c   u a 

Confidence

Annotation confidence: not enough data

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Genome context

Coordinates	Overlapping transcripts
Scf5bK3_12704: 8666-8731 [+]	intergenic
Scf5bK3_135: 249819-249884 [+]	intergenic

Database links

• miRBase Tracker:MI0038095

Mature sequence pte-miR-8-5p

• Accession: MIMAT0046223
• Sequence: 1 - caucuuaccaggcaguauuaga - 22
• Evidence: experimental; Illumina [1]

Mature sequence pte-miR-8-3p

• Accession: MIMAT0046224
• Sequence: 44 - uaauacugucagguaaagauguc - 66
• Evidence: experimental; Illumina [1]

References

1. PMID:27324919 "Pervasive microRNA Duplication in Chelicerates: Insights from the Embryonic microRNA Repertoire of the Spider Parasteatoda tepidariorum" Leite DJ, Ninova M, Hilbrant M, Arif S, Griffiths-Jones S, Ronshaugen M, McGregor AP Genome Biol Evol. 8:2133-2144(2016).