Stem-loop sequence pte-mir-11961a

AccessionMI0038141 (change log)
DescriptionParasteatoda tepidariorum miR-11961a stem-loop
Stem-loop 
   --g   -    u   c                 
5'    guc agua cug ugugauacggguggcg 
      ||| |||| ||| ||||||||||||||| c
3'    cag ucgu gau acacuaugcuuauuga 
   uua   a    -   a
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Confidence Annotation confidence: not enough data
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Genome context
Coordinates Overlapping transcripts
Scf5bK3_2297: 44299-44359 [+]
intergenic
Clustered miRNAs
< 10kb from pte-mir-11961a
pte-mir-11961aScf5bK3_2297: 44299-44359 [+]
pte-mir-11961cScf5bK3_2297: 45051-45112 [+]
pte-mir-11961bScf5bK3_2297: 46907-46967 [+]
Database links

Mature sequence pte-miR-11961a-5p

Accession MIMAT0046306
Sequence

1 -  

ggucaguaucugcugugauacg

 - 22

Get sequence
Evidence experimental; Illumina [1]

Mature sequence pte-miR-11961a-3p

Accession MIMAT0046307
Sequence

40 -  

uaucacaauagugcuagacauu

 - 61

Get sequence
Evidence experimental; Illumina [1]

References

1
PMID:27324919 "Pervasive microRNA Duplication in Chelicerates: Insights from the Embryonic microRNA Repertoire of the Spider Parasteatoda tepidariorum" Leite DJ, Ninova M, Hilbrant M, Arif S, Griffiths-Jones S, Ronshaugen M, McGregor AP Genome Biol Evol. 8:2133-2144(2016).