Stem-loop sequence bta-mir-2285bm

Accession

MI0038348 (change log)

Description

Bos taurus miR-2285bm stem-loop

Literature search

11 open access papers mention bta-mir-2285bm
(15 sentences)

Stem-loop

   -            a  g         gag 
5'  aaaaaguucauu gg uuuuucugu   a
    |||||||||||| || |||||||||    
3'  uuuuucagguga cc aaaaaggua   u
   g            g  a         ggg 

Deep sequencing

2584 reads, 7.69 reads per million, 52 experiments

Confidence

Annotation confidence: not enough data

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Genome context

• Coordinates (Btau_5.0.1; GCA_000003205.6): chr16: 20708677-20708735 [-]
• Overlapping transcripts:

  intergenic

Database links

• miRBase Tracker:MI0038348

Mature sequence bta-miR-2285bm

• Accession: MIMAT0046624
• Sequence: 38 - aaaaaaccgaguggacuuuuug - 59
• Deep sequencing: 2078 reads, 39 experiments
• Evidence: experimental; Illumina [1]

References

1. PMID:26519053 "Deep sequencing shows microRNA involvement in bovine mammary gland adaptation to diets supplemented with linseed oil or safflower oil" Li R, Beaudoin F, Ammah AA, Bissonnette N, Benchaar C, Zhao X, Lei C, Ibeagha-Awemu EM BMC Genomics. 16:884(2015).