miRBase entry: 26519053

Deep sequencing shows microRNA involvement in bovine mammary gland adaptation to diets supplemented with linseed oil or safflower oil

PubMed ID 26519053
Authors Li R, Beaudoin F, Ammah AA, Bissonnette N, Benchaar C, Zhao X, Lei C, Ibeagha-Awemu EM
Journal BMC Genomics
Volume 16
Pages 884

There are 265 miRNAs associated with this paper:
Name Accession RPM Chromosome Start End Strand Confidence
bta-mir-11986b MI0038345 62 20 10264043 10264099 - High
bta-mir-2285bk MI0038346 2 1 73941736 73941792 + Medium
bta-mir-2285bl MI0038347 2 28 10344183 10344248 - High
bta-mir-2285bm MI0038348 141 16 19928659 19928717 - High
bta-mir-2285bn MI0038349 33 X 62380761 62380820 - High
bta-mir-7180 MI0038350 13 16 32263797 32263855 - High
bta-mir-2285bo MI0038351 4 3 99145352 99145409 - -
bta-mir-11989 MI0038352 5 10 20965617 20965669 + -
bta-mir-11990 MI0038353 2 22 4221469 4221527 + High
bta-mir-1911 MI0038354 1 X 63096211 63096270 + -
bta-mir-11991 MI0038355 27 3 94548208 94548265 - High
bta-mir-11992 MI0038356 12 7 62060887 62060946 - High
bta-mir-2285bp MI0038357 10 15 77501541 77501601 - High
bta-mir-11993 MI0038358 5 6 117644395 117644448 + High
bta-mir-2285bq MI0038359 0 6 22191532 22191591 - -
bta-mir-2285br MI0038360 11 8 76276272 76276331 + Medium
bta-mir-2285bs MI0038361 29 1 1727075 1727135 - Medium
bta-mir-11986c MI0038362 29 X 37488593 37488652 - High
bta-mir-2285bt MI0038363 12 21 60272118 60272174 - High
bta-mir-2285bu-1 MI0038364 8 13 59841027 59841086 - Medium
bta-mir-2285bu-2 MI0038365 8 4 62797060 62797117 - -
bta-mir-2285bv MI0038366 2 7 108839651 108839704 + High
bta-mir-2285bw MI0038367 0 14 33977972 33978024 - Medium
bta-mir-2285bx MI0038368 8 15 44307107 44307164 + High
bta-mir-2285by MI0038369 5 7 19542123 19542178 + -
bta-mir-2285bz MI0038370 113 13 56850176 56850235 - Medium
bta-mir-11994 MI0038371 4 22 56110831 56110892 + High
bta-mir-11995 MI0038372 9 21 2254585 2254643 + High
bta-mir-11996 MI0038373 0 4 79289904 79289953 - -
bta-mir-2285ca MI0038374 5 5 109588749 109588808 + -
bta-mir-2285cb MI0038375 290 19 40752649 40752706 - Medium
bta-mir-2285cc MI0038376 5 13 42010060 42010117 - -
bta-mir-11997 MI0038377 1 21 27713492 27713580 + High
bta-mir-11998 MI0038378 6 chr13 34233014 34233072 - Low
bta-mir-2285cd MI0038379 292 8 21980327 21980386 - High
bta-mir-1264 MI0038380 2 X 62992996 62993058 + -
bta-mir-2285ce MI0038381 41 29 29184838 29184895 + High
bta-mir-11999 MI0038382 8 X 50855701 50855759 + -
bta-mir-12000 MI0038383 4 7 12356853 12356913 + High
bta-mir-12001 MI0038384 1 5 109644749 109644808 + -
bta-mir-12002a MI0038385 None 5 100112018 100112086 - -
bta-mir-12003 MI0038386 6 25 7897778 7897833 + Medium
bta-mir-2285cf MI0038387 11 1 127398725 127398781 - Medium
bta-mir-12004 MI0038388 15 20 31764932 31764983 + Medium
bta-mir-2285cg MI0038389 3 24 50079711 50079769 - -
bta-mir-12005-1 MI0038390 3 5 38144440 38144498 + High
bta-mir-12005-2 MI0038391 3 5 38144437 38144495 - High
bta-mir-12006 MI0038392 2 X 112544968 112545028 + High
bta-mir-12007 MI0038393 None 7 26205647 26205722 - -
bta-mir-299-2 MI0038394 3 21 65914212 65914263 - Medium
bta-mir-148d MI0038395 1 4 69949482 69949542 - Medium
bta-mir-2285ch MI0038396 5 1 122302967 122303028 + Medium
bta-mir-2285ci MI0038397 36 X 3211278 3211335 + High
bta-mir-6775 MI0038398 4 2 125974901 125974965 - -
bta-mir-2285cj MI0038399 34 gb|NKLS02002208.1| 5465835 5465893 - High
bta-mir-12008 MI0038400 5 16 66100534 66100594 + High
bta-mir-2285ck MI0038401 6 16 44910390 44910458 + High
bta-mir-12009 MI0038402 None 23 16407233 16407292 + -
bta-mir-12010 MI0038403 1 13 61133471 61133526 + High
bta-mir-12011 MI0038404 2 15 29299174 29299232 + Low
bta-mir-12012 MI0038405 42 7 71753563 71753614 + -
bta-mir-2285cl MI0038406 3 28 33284860 33284918 + -
bta-mir-2285cm MI0038407 41 1 34476824 34476884 - High
bta-mir-2285cn MI0038408 7 14 59236234 59236293 - High
bta-mir-12013 MI0038409 2 4 101614339 101614403 - High
bta-mir-6501 MI0038410 4 1 1978829 1978892 - High
bta-mir-2285co MI0038411 3 21 24415898 24415956 - Medium
bta-mir-2285cp MI0038412 6 X 55974843 55974898 + High
bta-mir-2285cq MI0038413 4 10 76312388 76312446 + High
bta-mir-12014 MI0038414 2 11 106207731 106207786 + -
bta-mir-12015 MI0038415 0 20 71263673 71263724 + -
bta-mir-2285cr-1 MI0038416 8 10 37152687 37152748 - High
bta-mir-2285cr-2 MI0038417 0 5 105544132 105544187 + -
bta-mir-2285cs MI0038418 7 6 61443447 61443505 + -
bta-mir-12002b MI0038419 1 5 100145447 100145510 + High
bta-mir-2285ct MI0038420 6 20 909791 909849 - High
bta-mir-12016 MI0038421 None 26 21313762 21313822 - Low
bta-mir-12017 MI0038422 3 24 54282518 54282578 - -
bta-mir-2285cu MI0038423 2 12 13876206 13876264 - Medium
bta-mir-2285cv-1 MI0038424 0 19 17969145 17969201 - High
bta-mir-2285cv-2 MI0038425 0 16 53601131 53601187 - High
bta-mir-12018 MI0038426 2 7 22962266 22962323 + Medium
bta-mir-2285cw-1 MI0038427 6 12 66702801 66702857 + Medium
bta-mir-2285cw-2 MI0038428 6 10 3413210 3413269 - High
bta-mir-2285cx MI0038429 8 9 10364232 10364290 - Medium
bta-mir-2285cy MI0038430 2 21 44480324 44480383 - High
bta-mir-2285cz MI0038431 2 16 53480364 53480419 - -
bta-mir-2285da MI0038432 14 8 59769431 59769489 - -
bta-mir-12019 MI0038433 None 25 40881730 40881805 + -
bta-mir-2285db MI0038434 0 9 62192023 62192079 + High
bta-mir-2285dc MI0038435 7 14 67820604 67820664 - High
bta-mir-12020 MI0038436 None 2 26401530 26401599 + Medium
bta-mir-2285dd MI0038437 13 X 130842262 130842318 + -
bta-mir-2285de MI0038438 1 1 62430103 62430159 + High
bta-mir-12021 MI0038439 None 8 59867623 59867679 + -
bta-mir-12022 MI0038440 107 2 104023569 104023631 - -
bta-mir-12023 MI0038441 10 29 42586689 42586742 + -
bta-mir-12024 MI0038442 3 4 46692307 46692373 - Medium
bta-mir-12025 MI0038443 0 21 65169462 65169520 + -
bta-mir-12026-1 MI0038444 0 2 135954742 135954787 + -
bta-mir-12026-2 MI0038445 0 2 135954719 135954761 + -
bta-mir-12027 MI0038446 1 14 3310118 3310175 + -
bta-mir-12028 MI0038447 1 13 44602930 44602993 + -
bta-mir-12029 MI0038448 0 25 40789469 40789530 - -
bta-mir-12030 MI0038449 0 11 24202347 24202422 - -
bta-mir-12031 MI0038450 2 10 19520837 19520902 + High
bta-mir-12032 MI0038451 2 20 2373109 2373165 + -
bta-mir-12033 MI0038452 1 23 29115535 29115601 - Medium
bta-mir-12034 MI0038453 15 13 38239543 38239614 - -
bta-mir-12035 MI0038454 0 7 13199148 13199210 - -
bta-mir-2285df MI0038455 1 13 42712405 42712461 + -
bta-mir-194b-2 MI0038456 12 29 43114587 43114639 + Medium
bta-mir-12036 MI0038457 3 17 34358675 34358736 - High
bta-mir-12037 MI0038458 0 17 9646778 9646843 + -
bta-mir-12038 MI0038459 1 18 57748534 57748591 - -
bta-mir-12039 MI0038460 None 3 109428520 109428578 - -
bta-mir-12040 MI0038461 None 7 22223499 22223560 - -
bta-mir-2285dg MI0038462 0 26 34922975 34923036 - -
bta-mir-12041 MI0038463 6 19 23377238 23377287 - -
bta-mir-191b MI0038464 4 22 50970992 50971055 - High
bta-mir-12042 MI0038465 3 25 10372691 10372750 - Medium
bta-mir-12043 MI0038466 0 3 87263822 87263874 - -
bta-mir-3065 MI0038467 1 19 51569631 51569693 - Medium
bta-mir-12044 MI0038468 3 12 11256601 11256665 - High
bta-mir-12045 MI0038469 0 1 1666063 1666125 - -
bta-mir-507b-1 MI0038470 2 X 29998359 29998416 - -
bta-mir-2285dh MI0038471 7 10 18690144 18690204 - -
bta-mir-2285di MI0038472 0 7 45889767 45889827 + High
bta-mir-2285dj MI0038473 2 13 10302835 10302892 - High
bta-mir-12046 MI0038474 1 15 80503037 80503090 - -
bta-mir-2285dk MI0038475 6 1 46802247 46802310 - Medium
bta-mir-12047 MI0038476 None gb|NKLS02002207.1| 544766 544827 + -
bta-mir-12048 MI0038477 1 X 13689864 13689925 - -
bta-mir-12049 MI0038478 2 11 75356019 75356075 - -
bta-mir-12050 MI0038479 None 16 41878277 41878336 + -
bta-mir-12051 MI0038480 2 24 31512912 31512962 + -
bta-mir-1949 MI0038481 78 7 50582819 50582886 + Medium
bta-mir-2285dl-1 MI0038482 18 10 33731081 33731139 - Medium
bta-mir-2285dl-2 MI0038483 18 13 21520935 21520994 - -
bta-mir-2285dm MI0038484 0 5 94634825 94634890 - -
bta-mir-12052 MI0038485 None 25 38125918 38125972 - Medium
bta-mir-12053 MI0038486 None 2 114951060 114951116 - -
bta-mir-12054 MI0038487 None 5 57031227 57031292 + -
bta-mir-12055 MI0038488 0 9 95202402 95202463 + -
bta-mir-12056 MI0038489 1 11 99603941 99604029 + -
bta-mir-12057 MI0038490 5 18 50042578 50042646 + Medium
bta-mir-12058 MI0038491 21 20 40374459 40374522 - -
bta-mir-12059 MI0038492 1 19 20253138 20253217 - -
bta-mir-12060 MI0038493 3 25 26215663 26215721 - High
bta-mir-12061 MI0038494 None 8 74862309 74862356 - -
bta-mir-12062 MI0038495 None 2 1095237 1095292 - -
bta-mir-12063 MI0038496 2 9 29836295 29836376 + -
bta-mir-12064 MI0038497 0 3 20331105 20331157 + -
hsa-let-7a-1 MI0000060 46519 chr9 94175957 94176036 + High
hsa-let-7a-2 MI0000061 46265 chr11 122146522 122146593 - High
hsa-let-7a-3 MI0000062 46706 chr22 46112749 46112822 + High
hsa-mir-21 MI0000077 28570 chr17 59841266 59841337 + High
hsa-mir-26a-1 MI0000083 11638 chr3 37969404 37969480 + High
hsa-mir-27a MI0000085 3484 chr19 13836440 13836517 - High
hsa-mir-28 MI0000086 1128 chr3 188688781 188688866 + High
hsa-mir-30a MI0000088 5468 chr6 71403551 71403621 - High
hsa-mir-96 MI0000098 613 chr7 129774692 129774769 - High
hsa-mir-98 MI0000100 616 chrX 53556223 53556341 - High
hsa-mir-99a MI0000101 1967 chr21 16539089 16539169 + High
hsa-mir-103a-2 MI0000108 15897 chr20 3917494 3917571 + High
hsa-mir-103a-1 MI0000109 15862 chr5 168560896 168560973 - High
hsa-mir-196a-1 MI0000238 1109 chr17 48632490 48632559 - High
hsa-mir-199a-1 MI0000242 10221 chr19 10817426 10817496 - High
hsa-mir-148a MI0000253 13144 chr7 25949919 25949986 - High
hsa-mir-30d MI0000255 2889 chr8 134804876 134804945 - High
hsa-mir-34a MI0000268 442 chr1 9151668 9151777 - High
hsa-mir-196a-2 MI0000279 1227 chr12 53991738 53991847 + High
hsa-mir-199a-2 MI0000281 10210 chr1 172144535 172144644 - High
hsa-mir-23b MI0000439 4243 chr9 95085208 95085304 + High
hsa-mir-27b MI0000440 4618 chr9 95085445 95085541 + High
hsa-mir-125b-1 MI0000446 5007 chr11 122099757 122099844 - High
hsa-mir-143 MI0000459 27646 chr5 149428918 149429023 + High
hsa-mir-145 MI0000461 20797 chr5 149430646 149430733 + High
hsa-mir-152 MI0000462 813 chr17 48037161 48037247 - High
hsa-mir-125a MI0000469 5127 chr19 51693254 51693339 + High
hsa-mir-125b-2 MI0000470 5102 chr21 16590237 16590325 + High
hsa-mir-194-1 MI0000488 266 chr1 220118157 220118241 - High
hsa-mir-194-2 MI0000732 297 chr11 64891355 64891439 - High
hsa-mir-200a MI0000737 1523 chr1 1167863 1167952 + High
hsa-mir-99b MI0000746 1445 chr19 51692612 51692681 + High
hsa-mir-26a-2 MI0000750 11698 chr12 57824609 57824692 - High
hsa-mir-378a MI0000786 6859 chr5 149732825 149732890 + High
hsa-mir-342 MI0000805 887 chr14 100109655 100109753 + High
hsa-mir-148b MI0000811 1329 chr12 54337216 54337314 + High
hsa-mir-338 MI0000814 385 chr17 81125883 81125949 - High
hsa-mir-335 MI0000816 4193 chr7 130496111 130496204 + High
hsa-mir-196b MI0001150 1494 chr7 27169480 27169563 - High
hsa-mir-484 MI0002468 612 chr16 15643294 15643372 + -
hsa-mir-486-1 MI0002470 1411 chr8 41660441 41660508 - High
hsa-mir-1271 MI0003814 246 chr5 176367946 176368031 + High
bta-mir-26a-2 MI0004731 21998 5 55652073 55652156 + High
bta-mir-103-1 MI0004736 1346 20 312539 312610 - High
bta-mir-148a MI0004737 20563 4 69949480 69949547 + High
bta-mir-21 MI0004742 17881 19 10803472 10803543 + High
bta-mir-27a MI0004746 1180 7 11838877 11838954 + High
bta-mir-30d MI0004747 5195 14 7041138 7041207 + High
bta-mir-484 MI0004749 129 25 14083795 14083857 + -
bta-mir-99a MI0004751 1583 1 20435343 20435423 - High
bta-mir-125a MI0004752 2184 18 57689557 57689642 + High
bta-mir-125b-1 MI0004753 1129 15 32763901 32763988 - High
bta-mir-145 MI0004756 2141 7 60813550 60813637 + High
bta-mir-199a-1 MI0004758 3207 16 39625344 39625447 - High
bta-mir-27b MI0004760 20982 8 81617240 81617336 + High
bta-mir-98 MI0005025 634 X 90985646 90985764 - High
bta-mir-148b MI0005030 279 5 25734105 25734194 - High
bta-mir-200a MI0005037 1139 16 51322680 51322765 - High
bta-mir-30a MI0005054 28347 9 10532171 10532237 - High
bta-let-7a-1 MI0005057 11865 8 85450397 85450476 + High
bta-mir-342 MI0005059 354 21 65057646 65057739 + Medium
bta-mir-23b MI0005066 1056 8 81617032 81617091 + High
bta-let-7a-2 MI0005451 11827 15 32812703 32812774 - High
bta-let-7a-3 MI0005452 11878 5 116408410 116408483 + High
bta-mir-103-2 MI0005456 1352 13 51282163 51282238 - High
bta-mir-125b-2 MI0005457 1232 1 20385501 20385585 - High
bta-mir-34a MI0005464 45 16 44308925 44309031 + High
bta-mir-99b MI0005469 1181 18 57688890 57688959 + High
hsa-mir-885 MI0005560 59 chr3 10394489 10394562 - High
hsa-mir-103b-1 MI0007261 0 chr5 168560904 168560965 + -
hsa-mir-103b-2 MI0007262 0 chr20 3917502 3917563 - -
bta-mir-143 MI0009743 223303 7 60812121 60812221 + High
bta-mir-152 MI0009748 219 19 38444475 38444560 + High
bta-mir-16a MI0009753 574 12 19500915 19501003 - High
bta-mir-194a-2 MI0009765 4433 29 43114571 43114653 - High
bta-mir-196a-2 MI0009766 96 5 26040793 26040877 - High
bta-mir-196a-1 MI0009767 118 19 37860865 37860966 + High
bta-mir-196b MI0009768 201 4 68873154 68873238 + High
bta-mir-199a-2 MI0009770 3202 7 15283412 15283482 - High
bta-mir-26a-1 MI0009784 21970 22 11420440 11420529 + High
bta-mir-28 MI0009785 1738 1 78661458 78661543 - High
bta-mir-335 MI0009804 104 4 94255083 94255174 + High
bta-mir-338 MI0009805 105 19 51569617 51569708 + High
bta-mir-378-1 MI0009819 4644 7 61076253 61076318 + High
bta-mir-486 MI0009843 516 27 36572754 36572877 - High
bta-mir-885 MI0009904 97 22 54438290 54438363 - High
bta-mir-96 MI0009911 130 4 93595920 93596022 - High
bta-mir-1271 MI0010480 38 7 37843326 37843411 + High
bta-mir-2299 MI0011309 24 12 29635268 29635346 - High
bta-mir-199c MI0011364 158 19 26131673 26131748 + -
bta-mir-1388 MI0012206 137 13 53904024 53904115 + High
bta-mir-194a-1 MI0012208 5679 16 23607933 23608029 - High
bta-mir-378-2 MI0013052 5068 4 10883955 10884030 + -
hsa-mir-378b MI0014154 37 chr3 10330229 10330285 + -
bta-mir-3431 MI0014498 105 X 34445007 34445103 - High
hsa-mir-378c MI0015825 4181 chr10 130962588 130962668 - -
hsa-mir-4286 MI0015894 195 chr8 10666978 10667070 + -
hsa-mir-378d-2 MI0003840 3410 chr8 93916022 93916119 - -
hsa-mir-378d-1 MI0016749 3385 chr4 5923275 5923328 - -
hsa-mir-378e MI0016750 246 chr5 170028488 170028566 + -
hsa-mir-378f MI0016756 31 chr1 23929070 23929147 + -
hsa-mir-378g MI0016761 30 None None -
hsa-mir-378h MI0016808 4 chr5 154829458 154829540 + -
hsa-mir-378i MI0016902 24 chr22 41923222 41923297 - -
bta-mir-4286-1 MI0021119 12 19 40034986 40035061 - -
bta-mir-4286-2 MI0021120 16 chrX 58196784 58196846 - Low
hsa-mir-378j MI0021273 1 chr17 37614931 37615039 - -
bta-mir-378b MI0022279 286 15 30197485 30197582 + -
bta-mir-378c MI0022299 749 24 31436256 31436324 - -
hsa-mir-486-2 MI0023622 1403 chr8 41660444 41660507 + High
bta-mir-378d MI0031501 115 19 8484500 8484590 - -
bta-mir-194b-1 MI0032935 20 16 23607939 23608023 + Medium



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