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miRBase entry: bta-mir-11998
How is the hairpin structure generated?
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We have generated a dot-bracket structure for each sequence using RNAfold.
Unambiguous secondary structure.
Parsed and ASCII art drawn.
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Dead hairpin entry
Stem-loop
bta-mir-11998
Accession
MI0038378
Description
Bos taurus
bta-mir-11998 precursor miRNA
Comment
The read data does not support this entry being a bona fide miRNA.
Sequence
22627
reads,
6.0
reads per million, 271 experiments
Show Histogram
Copy Sequence
uucccgggcaaggauacuagagAGGGUUGCCAUUUCCUUCUCUAGUGUGUUUUCCCAAC
.....(((.(((.(((((((((((((.........))))))))))))).))).)))...
Structure
uuccc c g UUG ggg aag auacuagagAGGG C ||| ||| ||||||||||||| C CCC UUU UGUGAUCUCUUCC A --CAA U G UUU