Stem-loop bta-mir-99b

Accession

MI0005469

Description

Bos taurus bta-mir-99b precursor miRNA

Literature search

62 open access papers mention bta-mir-99b
(158 sentences)

Sequence

3063344 reads, 1961.0 reads per million, 321 experiments

ggcaccCACCCGUAGAACCGACCUUGCGgggccuucgccgcacaCAAGCUCGUGUCUGUGGGUCCGUguc
(((((..(((((((((..(((.((((.(.(((....))).)...)))).)))..)))))))))..)))))

Structure

     cC         AC   C    --C g   c 
ggcac  ACCCGUAGA  CGA CUUG   G ggc u
|||||  |||||||||  ||| ||||   | |||  
cugUG  UGGGUGUCU  GCU GAAC   c ccg u
     CC         GU   C    aca g   c 

Annotation confidence High

Genome context

18: 57688890-57688959 [+]

Clustered miRNAs

2 other miRNAs are < 10 kb from bta-mir-99b

Mature bta-miR-99b-5p

• Accession: MIMAT0004345
• Description: Bos taurus bta-miR-99b-5p mature miRNA
• Sequence: 7 - CACCCGUAGAACCGACCUUGCG - 28
• Evidence: experimental ; cloned [1]

Mature bta-miR-99b-3p

• Accession: MIMAT0060976
• Description: Bos taurus bta-miR-99b-3p mature miRNA
• Sequence: 45 - CAAGCUCGUGUCUGUGGGUCCGU - 67
• Evidence: experimental ; cloned [1]

References

1. PubMed ID: 17306260
   Identification and characterization of microRNAs from the bovine adipose tissue and mammary gland
   "Gu Z, Eleswarapu S, Jiang H"
   "FEBS Lett (2007) 581:981-988