Stem-loop bta-mir-99b

Accession

MI0005469

Description

Bos taurus bta-mir-99b precursor miRNA

Gene family

MIPF0000033; mir-10

Literature search

21 open access papers mention bta-mir-99b
(44 sentences)

Sequence

91528 reads, 1181 reads per million, 77 experiments

ggcaccCACCCGUAGAACCGACCUUGCGgggccuucgccgcacacaagcucgugucuguggguccguguc
(((((..(((((((((..(((.((((.(.(((....))).)...)))).)))..)))))))))..)))))

Structure

     cC         AC   C    --C g   c 
ggcac  ACCCGUAGA  CGA CUUG   G ggc u
|||||  |||||||||  ||| ||||   | |||  
cugug  ugggugucu  gcu gaac   c ccg u
     cc         gu   c    aca g   c 

Annotation confidence High

Genome context

chr18: 58266580-58266649 [+]

Clustered miRNAs

2 other miRNAs are < 10 kb from bta-mir-99b

Mature bta-miR-99b

• Accession: MIMAT0004345
• Description: Bos taurus bta-miR-99b mature miRNA
• Sequence: 7 - CACCCGUAGAACCGACCUUGCG - 28
• Evidence: experimental ; cloned [1]

References

1. PubMed ID: 17306260
   Identification and characterization of microRNAs from the bovine adipose tissue and mammary gland
   "Gu Z, Eleswarapu S, Jiang H"
   "FEBS Lett (2007) 581:981-988